Gene
RNA
| Item | Value |
|---|---|
| gene id | G485706 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 850988 ~ 853533 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU557353 | True | 1035 | lncRNA | 0.41 | 2 | 850988 | 853533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_00710056_00726924 | NA | coding | upstream | 123493 | 709830 ~ 727495 (+) |
| CI01000340_00672283_00673853 | GADD45AB, GADD45A | coding | upstream | 176496 | 672283 ~ 674492 (+) |
| CI01000340_00630670_00634136 | NA | coding | upstream | 216757 | 630547 ~ 634231 (+) |
| CI01000340_00575085_00576868 | GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 | coding | upstream | 273532 | 574460 ~ 577456 (+) |
| CI01000340_00559281_00560682 | NA | coding | upstream | 290306 | 558024 ~ 560682 (+) |
| CI01000340_00883803_00902915 | NA | coding | downstream | 29868 | 883401 ~ 903402 (+) |
| CI01000340_00927319_01001912 | TGFBR3 | coding | downstream | 73786 | 927319 ~ 1001912 (+) |
| CI01000340_01065200_01074925 | ZNF644B | coding | downstream | 211116 | 1064649 ~ 1075153 (+) |
| CI01000340_01146151_01149216 | BARHL2 | coding | downstream | 291629 | 1145162 ~ 1149477 (+) |
| CI01000340_01322847_01325739 | NA | coding | downstream | 469314 | 1322847 ~ 1327211 (+) |
| G485693 | NA | non-coding | upstream | 22146 | 825626 ~ 828842 (+) |
| G485689 | NA | non-coding | upstream | 30091 | 820169 ~ 820897 (+) |
| G485671 | NA | non-coding | upstream | 53448 | 797199 ~ 797540 (+) |
| G485626 | NA | non-coding | upstream | 77328 | 769898 ~ 773660 (+) |
| G485659 | NA | non-coding | upstream | 92416 | 758346 ~ 758572 (+) |
| G485717 | NA | non-coding | downstream | 164801 | 1018334 ~ 1018547 (+) |
| G485718 | NA | non-coding | downstream | 165087 | 1018620 ~ 1018830 (+) |
| G485727 | NA | non-coding | downstream | 179835 | 1033368 ~ 1033603 (+) |
| G485733 | NA | non-coding | downstream | 191742 | 1045275 ~ 1045494 (+) |
| G486046 | NA | non-coding | downstream | 255323 | 1108856 ~ 1109188 (+) |
| CI01000340_00312480_00313262 | NA | other | upstream | 537743 | 312212 ~ 313534 (+) |
| G485427 | NA | other | upstream | 683354 | 163286 ~ 167634 (+) |
| G485373 | NA | other | upstream | 737219 | 106885 ~ 113769 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | downstream | 2076558 | 2930635 ~ 2933935 (+) |
| G487133 | NA | other | downstream | 3120382 | 3973915 ~ 3982545 (+) |
| CI01000340_04399692_04401164 | NA | other | downstream | 3545886 | 4399419 ~ 4401496 (+) |
| CI01000340_04660938_04668996 | NA | other | downstream | 3810776 | 4659584 ~ 4669322 (+) |
| G489634 | NA | other | downstream | 5840688 | 6694221 ~ 6700788 (+) |
