Gene
RNA
| Item | Value |
|---|---|
| gene id | G485947 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 985973 ~ 1011769 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU557635 | False | 2066 | lncRNA | 0.34 | 3 | 985973 | 1011769 |
| TU557634 | True | 3925 | lncRNA | 0.34 | 2 | 1007820 | 1011769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_00922398_00926008 | NA | coding | downstream | 59047 | 922073 ~ 926926 (-) |
| CI01000340_00878949_00880017 | NA | coding | downstream | 103742 | 877772 ~ 882231 (-) |
| CI01000340_00840521_00859645 | EPHX4 | coding | downstream | 126328 | 840074 ~ 859645 (-) |
| CI01000340_00798980_00828835 | NA | coding | downstream | 157138 | 798980 ~ 828835 (-) |
| CI01000340_00787534_00791061 | NA | coding | downstream | 194634 | 786551 ~ 791409 (-) |
| CI01000340_01119764_01121682 | NA | coding | upstream | 107920 | 1119689 ~ 1123636 (-) |
| CI01000340_01339075_01340999 | NA | coding | upstream | 326571 | 1338340 ~ 1341487 (-) |
| CI01000340_01356603_01359427 | NA | coding | upstream | 344691 | 1356460 ~ 1359427 (-) |
| CI01000340_01375418_01382944 | ZNF326 | coding | upstream | 363273 | 1375042 ~ 1382944 (-) |
| CI01000340_01385672_01396802 | LRRC8DB, LRRC8D | coding | upstream | 372980 | 1384749 ~ 1398796 (-) |
| G485986 | NA | non-coding | downstream | 7115 | 978188 ~ 978858 (-) |
| G485962 | NA | non-coding | downstream | 42304 | 942407 ~ 943669 (-) |
| G485954 | NA | non-coding | downstream | 53851 | 931601 ~ 932122 (-) |
| CI01000340_00683967_00684845 | GBG12, GNG12, GNG12.L, GNG12A | non-coding | downstream | 247667 | 682794 ~ 684865 (-) |
| G485888 | NA | non-coding | downstream | 296949 | 688022 ~ 689024 (-) |
| G485996 | NA | non-coding | upstream | 707 | 1012476 ~ 1012828 (-) |
| G486031 | NA | non-coding | upstream | 75850 | 1087619 ~ 1087876 (-) |
| G486035 | NA | non-coding | upstream | 79451 | 1091220 ~ 1091540 (-) |
| G486110 | NA | non-coding | upstream | 138323 | 1150092 ~ 1150317 (-) |
| G486153 | NA | non-coding | upstream | 201280 | 1213049 ~ 1223455 (-) |
| G485786 | NA | other | downstream | 660257 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 903878 | 62780 ~ 82095 (-) |
| G487884 | NA | other | upstream | 884032 | 1895801 ~ 1902272 (-) |
| G488782 | NA | other | upstream | 2994036 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 3495427 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 3588451 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 4308984 | 5320753 ~ 5330215 (-) |
