Gene
RNA
| Item | Value |
|---|---|
| gene id | G486276 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 1432444 ~ 1432671 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU557991 | True | 228 | lncRNA | 0.39 | 1 | 1432444 | 1432671 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_01422577_01422959 | NA | coding | downstream | 9485 | 1422463 ~ 1422959 (-) |
| CI01000340_01400601_01408156 | LRRC8C | coding | downstream | 24288 | 1399456 ~ 1408156 (-) |
| CI01000340_01385672_01396802 | LRRC8DB, LRRC8D | coding | downstream | 33648 | 1384749 ~ 1398796 (-) |
| CI01000340_01375418_01382944 | ZNF326 | coding | downstream | 49500 | 1375042 ~ 1382944 (-) |
| CI01000340_01356603_01359427 | NA | coding | downstream | 73017 | 1356460 ~ 1359427 (-) |
| CI01000340_01436981_01473643 | PKN2 | coding | upstream | 3718 | 1436389 ~ 1473643 (-) |
| CI01000340_01610308_01614177 | NA | coding | upstream | 177559 | 1610230 ~ 1614911 (-) |
| CI01000340_01620065_01624298 | NA | coding | upstream | 186590 | 1619261 ~ 1624726 (-) |
| CI01000340_01785945_01793672 | LMO4, LMO4B | coding | upstream | 353156 | 1785827 ~ 1793954 (-) |
| CI01000340_01839512_01846883 | NA | coding | upstream | 405606 | 1838277 ~ 1846893 (-) |
| G486289 | NA | non-coding | downstream | 145513 | 1286635 ~ 1286931 (-) |
| G486267 | NA | non-coding | downstream | 180480 | 1250482 ~ 1251964 (-) |
| G486153 | NA | non-coding | downstream | 208989 | 1213049 ~ 1223455 (-) |
| G486110 | NA | non-coding | downstream | 282127 | 1150092 ~ 1150317 (-) |
| G486035 | NA | non-coding | downstream | 340904 | 1091220 ~ 1091540 (-) |
| G486348 | NA | non-coding | upstream | 61768 | 1494439 ~ 1494642 (-) |
| G486406 | NA | non-coding | upstream | 124602 | 1557273 ~ 1557510 (-) |
| G487872 | NA | non-coding | upstream | 248689 | 1681360 ~ 1682396 (-) |
| G487878 | NA | non-coding | upstream | 299372 | 1732043 ~ 1732280 (-) |
| G487881 | NA | non-coding | upstream | 313566 | 1746237 ~ 1746499 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 641035 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 1106728 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 1350349 | 62780 ~ 82095 (-) |
| G487884 | NA | other | upstream | 463130 | 1895801 ~ 1902272 (-) |
| G488782 | NA | other | upstream | 2573134 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 3074525 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 3167549 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 3888082 | 5320753 ~ 5330215 (-) |
