Gene
RNA
| Item | Value |
|---|---|
| gene id | G486348 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 1494439 ~ 1494642 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU558067 | True | 204 | lncRNA | 0.37 | 1 | 1494439 | 1494642 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_01436981_01473643 | PKN2 | coding | downstream | 20796 | 1436389 ~ 1473643 (-) |
| CI01000340_01422577_01422959 | NA | coding | downstream | 71480 | 1422463 ~ 1422959 (-) |
| CI01000340_01400601_01408156 | LRRC8C | coding | downstream | 86283 | 1399456 ~ 1408156 (-) |
| CI01000340_01385672_01396802 | LRRC8DB, LRRC8D | coding | downstream | 95643 | 1384749 ~ 1398796 (-) |
| CI01000340_01375418_01382944 | ZNF326 | coding | downstream | 111495 | 1375042 ~ 1382944 (-) |
| CI01000340_01610308_01614177 | NA | coding | upstream | 115588 | 1610230 ~ 1614911 (-) |
| CI01000340_01620065_01624298 | NA | coding | upstream | 124619 | 1619261 ~ 1624726 (-) |
| CI01000340_01785945_01793672 | LMO4, LMO4B | coding | upstream | 291185 | 1785827 ~ 1793954 (-) |
| CI01000340_01839512_01846883 | NA | coding | upstream | 343635 | 1838277 ~ 1846893 (-) |
| CI01000340_01894781_01909824 | HS2ST1 | coding | upstream | 400032 | 1894674 ~ 1911359 (-) |
| G486276 | NA | non-coding | downstream | 61768 | 1432444 ~ 1432671 (-) |
| G486289 | NA | non-coding | downstream | 207508 | 1286635 ~ 1286931 (-) |
| G486267 | NA | non-coding | downstream | 242475 | 1250482 ~ 1251964 (-) |
| G486153 | NA | non-coding | downstream | 270984 | 1213049 ~ 1223455 (-) |
| G486110 | NA | non-coding | downstream | 344122 | 1150092 ~ 1150317 (-) |
| G486406 | NA | non-coding | upstream | 62631 | 1557273 ~ 1557510 (-) |
| G487872 | NA | non-coding | upstream | 186718 | 1681360 ~ 1682396 (-) |
| G487878 | NA | non-coding | upstream | 237401 | 1732043 ~ 1732280 (-) |
| G487881 | NA | non-coding | upstream | 251595 | 1746237 ~ 1746499 (-) |
| G487905 | NA | non-coding | upstream | 336160 | 1830802 ~ 1831023 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 703030 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 1168723 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 1412344 | 62780 ~ 82095 (-) |
| G487884 | NA | other | upstream | 401159 | 1895801 ~ 1902272 (-) |
| G488782 | NA | other | upstream | 2511163 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 3012554 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 3105578 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 3826111 | 5320753 ~ 5330215 (-) |
