Gene
RNA
| Item | Value |
|---|---|
| gene id | G487918 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 1924278 ~ 1925429 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU559807 | True | 395 | lncRNA | 0.43 | 3 | 1924278 | 1925429 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_01916883_01917263 | NA | coding | downstream | 6926 | 1915653 ~ 1917352 (-) |
| CI01000340_01894781_01909824 | HS2ST1 | coding | downstream | 12919 | 1894674 ~ 1911359 (-) |
| CI01000340_01839512_01846883 | NA | coding | downstream | 77385 | 1838277 ~ 1846893 (-) |
| CI01000340_01785945_01793672 | LMO4, LMO4B | coding | downstream | 130324 | 1785827 ~ 1793954 (-) |
| CI01000340_01620065_01624298 | NA | coding | downstream | 299552 | 1619261 ~ 1624726 (-) |
| CI01000340_01952181_01975472 | NA | coding | upstream | 26086 | 1951515 ~ 1976286 (-) |
| CI01000340_02008099_02012700 | SOX14.S, SOX14 | coding | upstream | 82593 | 2008022 ~ 2012700 (-) |
| CI01000340_02172629_02189732 | HDLBP, HDLBPA | coding | upstream | 246254 | 2171683 ~ 2189732 (-) |
| CI01000340_02293072_02301920 | STK25B, STK25, STK25A | coding | upstream | 367585 | 2293014 ~ 2302947 (-) |
| CI01000340_02329631_02332000 | DTYMK | coding | upstream | 404177 | 2329606 ~ 2332000 (-) |
| G487905 | NA | non-coding | downstream | 93255 | 1830802 ~ 1831023 (-) |
| G487881 | NA | non-coding | downstream | 177779 | 1746237 ~ 1746499 (-) |
| G487878 | NA | non-coding | downstream | 191998 | 1732043 ~ 1732280 (-) |
| G487872 | NA | non-coding | downstream | 241882 | 1681360 ~ 1682396 (-) |
| G486406 | NA | non-coding | downstream | 366768 | 1557273 ~ 1557510 (-) |
| G487929 | NA | non-coding | upstream | 15898 | 1941327 ~ 1941535 (-) |
| G487942 | NA | non-coding | upstream | 48933 | 1974362 ~ 1974874 (-) |
| G487971 | NA | non-coding | upstream | 65145 | 1990574 ~ 1992638 (-) |
| G488096 | NA | non-coding | upstream | 240563 | 2165992 ~ 2166240 (-) |
| G488101 | NA | non-coding | upstream | 268897 | 2194326 ~ 2194550 (-) |
| G487884 | NA | other | downstream | 22006 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 1132869 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 1598562 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 1842183 | 62780 ~ 82095 (-) |
| G488782 | NA | other | upstream | 2080376 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 2581767 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 2674791 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 3395324 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 4257861 | 6095704 ~ 6194501 (-) |
