Gene
RNA
| Item | Value |
|---|---|
| gene id | G488276 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 2702401 ~ 2769316 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560216 | True | 349 | lncRNA | 0.38 | 2 | 2702401 | 2769316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_02567081_02567521 | NA | coding | downstream | 134758 | 2566737 ~ 2567643 (-) |
| CI01000340_02341068_02348409 | NA | coding | downstream | 353924 | 2340503 ~ 2348477 (-) |
| CI01000340_02333476_02337529 | AGXTA | coding | downstream | 364872 | 2333102 ~ 2337529 (-) |
| CI01000340_02329631_02332000 | DTYMK | coding | downstream | 370401 | 2329606 ~ 2332000 (-) |
| CI01000340_02293072_02301920 | STK25B, STK25, STK25A | coding | downstream | 399454 | 2293014 ~ 2302947 (-) |
| CI01000340_02936853_02939837 | BCL6A, BCL6 | coding | upstream | 166321 | 2935637 ~ 2939837 (-) |
| CI01000340_03342324_03363204 | TOMM70, TOMM70A | coding | upstream | 572985 | 3342301 ~ 3363619 (-) |
| CI01000340_03379959_03401892 | GFI1AB, GFI1 | coding | upstream | 609970 | 3379286 ~ 3401952 (-) |
| CI01000340_03403238_03403692 | NA | coding | upstream | 633907 | 3403223 ~ 3403692 (-) |
| CI01000340_03406706_03449487 | EVI5 | coding | upstream | 637158 | 3406474 ~ 3449487 (-) |
| G488251 | NA | non-coding | downstream | 47746 | 2648354 ~ 2654655 (-) |
| G488247 | NA | non-coding | downstream | 68584 | 2633573 ~ 2633817 (-) |
| G488207 | NA | non-coding | downstream | 143934 | 2554516 ~ 2558467 (-) |
| G488201 | NA | non-coding | downstream | 182842 | 2518832 ~ 2519559 (-) |
| G488197 | NA | non-coding | downstream | 187097 | 2515103 ~ 2515304 (-) |
| G488303 | NA | non-coding | upstream | 9262 | 2778578 ~ 2780461 (-) |
| G488302 | NA | non-coding | upstream | 12197 | 2781513 ~ 2783739 (-) |
| G488304 | NA | non-coding | upstream | 16351 | 2785667 ~ 2786091 (-) |
| G488325 | NA | non-coding | upstream | 36697 | 2806013 ~ 2806242 (-) |
| G488346 | NA | non-coding | upstream | 63667 | 2832983 ~ 2833205 (-) |
| G487884 | NA | other | downstream | 800129 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 1910992 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 2376685 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 2620306 | 62780 ~ 82095 (-) |
| G488782 | NA | other | upstream | 1236489 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 1737880 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 1830904 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 2551437 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 3413974 | 6095704 ~ 6194501 (-) |
