G486899


Basic Information

Item Value
gene id G486899
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 2811275 ~ 2811503 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU558676
GATATCGCAATGGTCATGGACAACTACACATTTTCGACAGTAATTTTAAGATGTGAGCAGCTGTCCTTTGCATGAGGAAAGGATTTTTTGAAAGGGGTCGAGGGGTCATTAGTGGACTACTGGCCCTTAGGCCAGGATGGATTTGGTTAGGCAAATGAAAGGCCAAAAGGGCTGGTTGAAATATGGCAGAGGTGATGAGAGAGATAGAGATCACTGCCCCAGCATCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU558676 True 229 lncRNA 0.46 1 2811275 2811503

Neighbor

gene id symbol gene type direction distance location
CI01000340_02786463_02787025 NA coding upstream 23340 2785907 ~ 2787935 (+)
CI01000340_02767940_02783266 CEP63 coding upstream 27555 2766642 ~ 2783720 (+)
CI01000340_02719436_02720381 RAB6A coding upstream 90871 2719436 ~ 2720404 (+)
CI01000340_02643819_02656971 NA coding upstream 154069 2643819 ~ 2657206 (+)
CI01000340_02592385_02630762 RYK coding upstream 180467 2591634 ~ 2630808 (+)
CI01000340_02817499_02825652 AMOTL2A, AMOTL2 coding downstream 5791 2817294 ~ 2825747 (+)
CI01000340_02846209_02868305 SAP130A coding downstream 34706 2846209 ~ 2868859 (+)
CI01000340_02870871_02899752 NA coding downstream 59368 2870871 ~ 2900011 (+)
CI01000340_02905987_02907006 GPR17 coding downstream 93625 2905128 ~ 2907074 (+)
CI01000340_02911658_02928746 INPP5D coding downstream 99470 2910973 ~ 2929344 (+)
G486891 NA non-coding upstream 16719 2793806 ~ 2794556 (+)
G486802 NA non-coding upstream 74068 2736681 ~ 2737207 (+)
G486795 NA non-coding upstream 83474 2726618 ~ 2727801 (+)
G486788 NA non-coding upstream 96326 2713727 ~ 2714949 (+)
G486732 NA non-coding upstream 302475 2508513 ~ 2508800 (+)
G486904 NA non-coding downstream 4457 2815960 ~ 2816177 (+)
G486913 NA non-coding downstream 30209 2841712 ~ 2895831 (+)
G486927 NA non-coding downstream 98758 2910261 ~ 2910542 (+)
CI01000340_02930635_02933799 LSM2 non-coding downstream 121201 2930635 ~ 2933935 (+)
G486858 NA non-coding downstream 152792 2964295 ~ 2964607 (+)
CI01000340_00312480_00313262 NA other upstream 2498030 312212 ~ 313534 (+)
G485427 NA other upstream 2643641 163286 ~ 167634 (+)
G485373 NA other upstream 2697506 106885 ~ 113769 (+)
G487133 NA other downstream 1162412 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 1587916 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 1852806 4659584 ~ 4669322 (+)
G489634 NA other downstream 3882718 6694221 ~ 6700788 (+)

Expression


Co-expression Network