Gene
RNA
| Item | Value |
|---|---|
| gene id | G488346 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 2832983 ~ 2833205 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560303 | True | 223 | lncRNA | 0.42 | 1 | 2832983 | 2833205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_02567081_02567521 | NA | coding | downstream | 265340 | 2566737 ~ 2567643 (-) |
| CI01000340_02341068_02348409 | NA | coding | downstream | 484506 | 2340503 ~ 2348477 (-) |
| CI01000340_02333476_02337529 | AGXTA | coding | downstream | 495454 | 2333102 ~ 2337529 (-) |
| CI01000340_02329631_02332000 | DTYMK | coding | downstream | 500983 | 2329606 ~ 2332000 (-) |
| CI01000340_02293072_02301920 | STK25B, STK25, STK25A | coding | downstream | 530036 | 2293014 ~ 2302947 (-) |
| CI01000340_02936853_02939837 | BCL6A, BCL6 | coding | upstream | 102432 | 2935637 ~ 2939837 (-) |
| CI01000340_03342324_03363204 | TOMM70, TOMM70A | coding | upstream | 509096 | 3342301 ~ 3363619 (-) |
| CI01000340_03379959_03401892 | GFI1AB, GFI1 | coding | upstream | 546081 | 3379286 ~ 3401952 (-) |
| CI01000340_03403238_03403692 | NA | coding | upstream | 570018 | 3403223 ~ 3403692 (-) |
| CI01000340_03406706_03449487 | EVI5 | coding | upstream | 573269 | 3406474 ~ 3449487 (-) |
| G488325 | NA | non-coding | downstream | 26741 | 2806013 ~ 2806242 (-) |
| G488304 | NA | non-coding | downstream | 46892 | 2785667 ~ 2786091 (-) |
| G488302 | NA | non-coding | downstream | 49244 | 2781513 ~ 2783739 (-) |
| G488303 | NA | non-coding | downstream | 52522 | 2778578 ~ 2780461 (-) |
| G488306 | NA | non-coding | downstream | 59566 | 2767168 ~ 2773417 (-) |
| G488359 | NA | non-coding | upstream | 22054 | 2855259 ~ 2858243 (-) |
| G488371 | NA | non-coding | upstream | 72780 | 2905985 ~ 2908619 (-) |
| G488334 | NA | non-coding | upstream | 92549 | 2925754 ~ 2928685 (-) |
| G488378 | NA | non-coding | upstream | 101137 | 2934342 ~ 2934655 (-) |
| G488341 | NA | non-coding | upstream | 110016 | 2943221 ~ 2945567 (-) |
| G487884 | NA | other | downstream | 930711 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 2041574 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 2507267 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 2750888 | 62780 ~ 82095 (-) |
| G488782 | NA | other | upstream | 1172600 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 1673991 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 1767015 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 2487548 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 3350085 | 6095704 ~ 6194501 (-) |
