Gene
RNA
| Item | Value |
|---|---|
| gene id | G488388 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 2978091 ~ 2978316 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560348 | True | 226 | lncRNA | 0.37 | 1 | 2978091 | 2978316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_02936853_02939837 | BCL6A, BCL6 | coding | downstream | 38254 | 2935637 ~ 2939837 (-) |
| CI01000340_02567081_02567521 | NA | coding | downstream | 410448 | 2566737 ~ 2567643 (-) |
| CI01000340_02341068_02348409 | NA | coding | downstream | 629614 | 2340503 ~ 2348477 (-) |
| CI01000340_02333476_02337529 | AGXTA | coding | downstream | 640562 | 2333102 ~ 2337529 (-) |
| CI01000340_02329631_02332000 | DTYMK | coding | downstream | 646091 | 2329606 ~ 2332000 (-) |
| CI01000340_03342324_03363204 | TOMM70, TOMM70A | coding | upstream | 363985 | 3342301 ~ 3363619 (-) |
| CI01000340_03379959_03401892 | GFI1AB, GFI1 | coding | upstream | 400970 | 3379286 ~ 3401952 (-) |
| CI01000340_03403238_03403692 | NA | coding | upstream | 424907 | 3403223 ~ 3403692 (-) |
| CI01000340_03406706_03449487 | EVI5 | coding | upstream | 428158 | 3406474 ~ 3449487 (-) |
| CI01000340_03474617_03478517 | FAM69AB, FAM69A | coding | upstream | 495644 | 3473960 ~ 3478517 (-) |
| G488387 | NA | non-coding | downstream | 324 | 2977091 ~ 2977767 (-) |
| G488384 | NA | non-coding | downstream | 13506 | 2964298 ~ 2964585 (-) |
| G488341 | NA | non-coding | downstream | 32524 | 2943221 ~ 2945567 (-) |
| G488378 | NA | non-coding | downstream | 43436 | 2934342 ~ 2934655 (-) |
| G488334 | NA | non-coding | downstream | 49406 | 2925754 ~ 2928685 (-) |
| G488392 | NA | non-coding | upstream | 3028 | 2981344 ~ 3053730 (-) |
| G488395 | NA | non-coding | upstream | 42831 | 3021147 ~ 3044942 (-) |
| G488507 | NA | non-coding | upstream | 187016 | 3165332 ~ 3185994 (-) |
| G488534 | NA | non-coding | upstream | 233075 | 3211391 ~ 3211624 (-) |
| G488540 | NA | non-coding | upstream | 237135 | 3215451 ~ 3215703 (-) |
| G487884 | NA | other | downstream | 1075819 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 2186682 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 2652375 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 2895996 | 62780 ~ 82095 (-) |
| G488782 | NA | other | upstream | 1027489 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 1528880 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 1621904 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 2342437 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 3204974 | 6095704 ~ 6194501 (-) |
