G486929


Basic Information

Item Value
gene id G486929
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 2980586 ~ 2980904 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU558706
TATACAGTCAAACCAAAATTTATTCAGACACCTTGAACTTTTCATTTATTAATACAGTTTATTCACTATAGTTTAAAAAAAAATGGTAATAAAATATGACAAGATCTCAGAGTTAAACTGTGTCAGAAAAAAATTATCTTAATTATGTCAGATAACAGATTAAGCAAAACATGGTCAGGTCAAAGTGTCTGAATAATTTTTGGTTCCAAATTTTTATCAATTTTACTGGTAGTCCACTGTATGAAGAATTTTTGGGTATAATATGTCACAGTTTATTTTGCTATCCTCAATTACATAAATGAACTATAGTGTCCTGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU558706 True 319 lncRNA 0.28 1 2980586 2980904

Neighbor

gene id symbol gene type direction distance location
CI01000340_02930635_02933799 LSM2 coding upstream 46696 2930635 ~ 2933935 (+)
CI01000340_02911658_02928746 INPP5D coding upstream 51242 2910973 ~ 2929344 (+)
CI01000340_02905987_02907006 GPR17 coding upstream 73512 2905128 ~ 2907074 (+)
CI01000340_02870871_02899752 NA coding upstream 80575 2870871 ~ 2900011 (+)
CI01000340_02846209_02868305 SAP130A coding upstream 111727 2846209 ~ 2868859 (+)
CI01000340_03053157_03201683 LPP coding downstream 72253 3053157 ~ 3201683 (+)
CI01000340_03242647_03264271 NA coding downstream 261743 3242647 ~ 3264850 (+)
CI01000340_03291151_03315214 NA coding downstream 309743 3290647 ~ 3315757 (+)
CI01000340_03320562_03329314 TP63 coding downstream 339565 3320469 ~ 3329682 (+)
CI01000340_03370316_03378878 NA coding downstream 389371 3370275 ~ 3379000 (+)
G486858 NA non-coding upstream 15979 2964295 ~ 2964607 (+)
G486927 NA non-coding upstream 70044 2910261 ~ 2910542 (+)
G486913 NA non-coding upstream 84755 2841712 ~ 2895831 (+)
G486904 NA non-coding upstream 164409 2815960 ~ 2816177 (+)
G486948 NA non-coding downstream 240682 3221586 ~ 3221789 (+)
G486965 NA non-coding downstream 275190 3256094 ~ 3256816 (+)
G486972 NA non-coding downstream 296009 3276913 ~ 3277114 (+)
G486986 NA non-coding downstream 386117 3367021 ~ 3370826 (+)
G486990 NA non-coding downstream 395816 3376720 ~ 3377010 (+)
CI01000340_00312480_00313262 NA other upstream 2667341 312212 ~ 313534 (+)
G485427 NA other upstream 2812952 163286 ~ 167634 (+)
G485373 NA other upstream 2866817 106885 ~ 113769 (+)
G487133 NA other downstream 993011 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 1418515 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 1683405 4659584 ~ 4669322 (+)
G489634 NA other downstream 3713317 6694221 ~ 6700788 (+)
G490645 NA other downstream 6057908 9038812 ~ 9043101 (+)

Expression


Co-expression Network