G487037


Basic Information

Item Value
gene id G487037
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 3539768 ~ 3539996 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU558828
AACGGCGCGAGGCCGGTGGCGCGAGTGATAATGAGCGTCAGCTGCGCATTGCACCGGTCTCGTATCTCTCGTGGAGGAGCTCCGGAAGCATAAAAGGAGGAGCGACGACAGTGAAGGACGAGAGAGGACCAGACCTGGACTTTATGTTACGTTTTATTATGTTTGTGTGGCCGACAGTCAGCCGTGAGGGACTGCCGGCATTTTACTTTCGTTTTGTGTTTGTTTATTT

Function

NR:

description
PREDICTED: zinc finger protein 717-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU558828 True 229 lncRNA 0.52 1 3539768 3539996

Neighbor

gene id symbol gene type direction distance location
CI01000340_03471633_03472401 RPL5A, RPL5B, RPL5 coding upstream 67317 3471633 ~ 3472451 (+)
CI01000340_03370316_03378878 NA coding upstream 160768 3370275 ~ 3379000 (+)
CI01000340_03320562_03329314 TP63 coding upstream 210086 3320469 ~ 3329682 (+)
CI01000340_03291151_03315214 NA coding upstream 224011 3290647 ~ 3315757 (+)
CI01000340_03242647_03264271 NA coding upstream 274918 3242647 ~ 3264850 (+)
CI01000340_03552817_03560264 NA coding downstream 12353 3552349 ~ 3560324 (+)
CI01000340_03601425_03606062 NA coding downstream 60497 3600493 ~ 3606138 (+)
CI01000340_03616496_03620617 NA coding downstream 76500 3616496 ~ 3620970 (+)
CI01000340_03662829_03666784 ACTL6A coding downstream 122764 3662760 ~ 3666784 (+)
CI01000340_03679908_03709888 USP13 coding downstream 139828 3679824 ~ 3710049 (+)
G486865 NA non-coding upstream 14653 3524404 ~ 3525115 (+)
G486856 NA non-coding upstream 15912 3521566 ~ 3523856 (+)
G486847 NA non-coding upstream 127112 3409173 ~ 3412656 (+)
G486997 NA non-coding upstream 147646 3391700 ~ 3392122 (+)
G486996 NA non-coding upstream 151257 3388297 ~ 3388511 (+)
G487152 NA non-coding downstream 257068 3797064 ~ 3797986 (+)
G487141 NA non-coding downstream 262051 3802047 ~ 3858204 (+)
G487125 NA non-coding downstream 327812 3867808 ~ 3870067 (+)
G487184 NA non-coding downstream 338898 3878894 ~ 3879122 (+)
G487186 NA non-coding downstream 340012 3880008 ~ 3880250 (+)
CI01000340_02930635_02933799 LSM2 other upstream 607968 2930635 ~ 2933935 (+)
CI01000340_00312480_00313262 NA other upstream 3226523 312212 ~ 313534 (+)
G485427 NA other upstream 3372134 163286 ~ 167634 (+)
G485373 NA other upstream 3425999 106885 ~ 113769 (+)
G487133 NA other downstream 433919 3973915 ~ 3982545 (+)
CI01000340_04399692_04401164 NA other downstream 859423 4399419 ~ 4401496 (+)
CI01000340_04660938_04668996 NA other downstream 1124313 4659584 ~ 4669322 (+)
G489634 NA other downstream 3154225 6694221 ~ 6700788 (+)
G490645 NA other downstream 5498816 9038812 ~ 9043101 (+)

Expression


Co-expression Network