Gene
RNA
| Item | Value |
|---|---|
| gene id | G488756 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 3904053 ~ 3904265 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560746 | True | 213 | lncRNA | 0.28 | 1 | 3904053 | 3904265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_03750211_03772917 | NA | coding | downstream | 130137 | 3749935 ~ 3773916 (-) |
| CI01000340_03713291_03747080 | PEX5L, PEX5LA | coding | downstream | 156781 | 3712753 ~ 3747272 (-) |
| CI01000340_03670820_03675367 | NA | coding | downstream | 228686 | 3670713 ~ 3675367 (-) |
| CI01000340_03622734_03659141 | TMEM131 | coding | downstream | 244897 | 3621970 ~ 3659156 (-) |
| CI01000340_03607549_03614126 | BIVM | coding | downstream | 289927 | 3607130 ~ 3614126 (-) |
| CI01000340_04086574_04090310 | NA | coding | upstream | 181965 | 4086230 ~ 4090310 (-) |
| CI01000340_04277249_04284722 | NA | coding | upstream | 372874 | 4277139 ~ 4285407 (-) |
| CI01000340_04362537_04371224 | LURAP1 | coding | upstream | 458110 | 4362375 ~ 4371224 (-) |
| CI01000340_04381260_04383972 | TTC4 | coding | upstream | 476819 | 4381084 ~ 4383972 (-) |
| CI01000340_04384950_04386594 | PARS2 | coding | upstream | 480545 | 4384810 ~ 4386594 (-) |
| G488593 | NA | non-coding | downstream | 10881 | 3892769 ~ 3893172 (-) |
| G488750 | NA | non-coding | downstream | 29315 | 3874458 ~ 3874738 (-) |
| G488748 | NA | non-coding | downstream | 32042 | 3871684 ~ 3872011 (-) |
| G488568 | NA | non-coding | downstream | 34177 | 3867804 ~ 3869876 (-) |
| G488588 | NA | non-coding | downstream | 40480 | 3863152 ~ 3863573 (-) |
| G488758 | NA | non-coding | upstream | 17190 | 3921455 ~ 3922069 (-) |
| G488759 | NA | non-coding | upstream | 18420 | 3922685 ~ 3922916 (-) |
| G488768 | NA | non-coding | upstream | 40540 | 3944805 ~ 3945071 (-) |
| G488579 | NA | non-coding | upstream | 43110 | 3947375 ~ 3950335 (-) |
| G488569 | NA | non-coding | upstream | 46159 | 3950424 ~ 3951116 (-) |
| G487884 | NA | other | downstream | 2001781 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 3112644 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 3578337 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 3821958 | 62780 ~ 82095 (-) |
| G488782 | NA | other | upstream | 101540 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 602931 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 695955 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 1416488 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 2279025 | 6095704 ~ 6194501 (-) |
