Gene
RNA
| Item | Value |
|---|---|
| gene id | G488579 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 3947375 ~ 3950335 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560558 | True | 2961 | lncRNA | 0.35 | 1 | 3947375 | 3950335 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_03750211_03772917 | NA | coding | downstream | 173459 | 3749935 ~ 3773916 (-) |
| CI01000340_03713291_03747080 | PEX5L, PEX5LA | coding | downstream | 200103 | 3712753 ~ 3747272 (-) |
| CI01000340_03670820_03675367 | NA | coding | downstream | 272008 | 3670713 ~ 3675367 (-) |
| CI01000340_03622734_03659141 | TMEM131 | coding | downstream | 288219 | 3621970 ~ 3659156 (-) |
| CI01000340_03607549_03614126 | BIVM | coding | downstream | 333249 | 3607130 ~ 3614126 (-) |
| CI01000340_04086574_04090310 | NA | coding | upstream | 135895 | 4086230 ~ 4090310 (-) |
| CI01000340_04277249_04284722 | NA | coding | upstream | 326804 | 4277139 ~ 4285407 (-) |
| CI01000340_04362537_04371224 | LURAP1 | coding | upstream | 412040 | 4362375 ~ 4371224 (-) |
| CI01000340_04381260_04383972 | TTC4 | coding | upstream | 430749 | 4381084 ~ 4383972 (-) |
| CI01000340_04384950_04386594 | PARS2 | coding | upstream | 434475 | 4384810 ~ 4386594 (-) |
| G488768 | NA | non-coding | downstream | 2304 | 3944805 ~ 3945071 (-) |
| G488759 | NA | non-coding | downstream | 24459 | 3922685 ~ 3922916 (-) |
| G488758 | NA | non-coding | downstream | 25306 | 3921455 ~ 3922069 (-) |
| G488756 | NA | non-coding | downstream | 43110 | 3904053 ~ 3904265 (-) |
| G488593 | NA | non-coding | downstream | 54203 | 3892769 ~ 3893172 (-) |
| G488569 | NA | non-coding | upstream | 89 | 3950424 ~ 3951116 (-) |
| G488583 | NA | non-coding | upstream | 871 | 3951206 ~ 3958828 (-) |
| G488770 | NA | non-coding | upstream | 34410 | 3984745 ~ 3985271 (-) |
| G488771 | NA | non-coding | upstream | 35637 | 3985972 ~ 3986218 (-) |
| G488772 | NA | non-coding | upstream | 37554 | 3987889 ~ 3988847 (-) |
| G487884 | NA | other | downstream | 2045103 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 3155966 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 3621659 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 3865280 | 62780 ~ 82095 (-) |
| G488782 | NA | other | upstream | 55470 | 4005805 ~ 4006448 (-) |
| G488862 | NA | other | upstream | 556861 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 649885 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 1370418 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 2232955 | 6095704 ~ 6194501 (-) |
