Gene
RNA
| Item | Value |
|---|---|
| gene id | G488791 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 4020865 ~ 4021256 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560781 | True | 392 | lncRNA | 0.29 | 1 | 4020865 | 4021256 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_03750211_03772917 | NA | coding | downstream | 246949 | 3749935 ~ 3773916 (-) |
| CI01000340_03713291_03747080 | PEX5L, PEX5LA | coding | downstream | 273593 | 3712753 ~ 3747272 (-) |
| CI01000340_03670820_03675367 | NA | coding | downstream | 345498 | 3670713 ~ 3675367 (-) |
| CI01000340_03622734_03659141 | TMEM131 | coding | downstream | 361709 | 3621970 ~ 3659156 (-) |
| CI01000340_03607549_03614126 | BIVM | coding | downstream | 406739 | 3607130 ~ 3614126 (-) |
| CI01000340_04086574_04090310 | NA | coding | upstream | 64974 | 4086230 ~ 4090310 (-) |
| CI01000340_04277249_04284722 | NA | coding | upstream | 255883 | 4277139 ~ 4285407 (-) |
| CI01000340_04362537_04371224 | LURAP1 | coding | upstream | 341119 | 4362375 ~ 4371224 (-) |
| CI01000340_04381260_04383972 | TTC4 | coding | upstream | 359828 | 4381084 ~ 4383972 (-) |
| CI01000340_04384950_04386594 | PARS2 | coding | upstream | 363554 | 4384810 ~ 4386594 (-) |
| G488790 | NA | non-coding | downstream | 124 | 4020218 ~ 4020741 (-) |
| G488789 | NA | non-coding | downstream | 654 | 4019866 ~ 4020211 (-) |
| G488788 | NA | non-coding | downstream | 4677 | 4015875 ~ 4016188 (-) |
| G488787 | NA | non-coding | downstream | 5113 | 4015537 ~ 4015752 (-) |
| G488786 | NA | non-coding | downstream | 7392 | 4012759 ~ 4013473 (-) |
| G488792 | NA | non-coding | upstream | 4596 | 4025852 ~ 4026054 (-) |
| G488793 | NA | non-coding | upstream | 5895 | 4027151 ~ 4027422 (-) |
| G488586 | NA | non-coding | upstream | 8890 | 4030146 ~ 4033228 (-) |
| G488794 | NA | non-coding | upstream | 12301 | 4033557 ~ 4033864 (-) |
| G488795 | NA | non-coding | upstream | 12890 | 4034146 ~ 4034379 (-) |
| G488782 | NA | other | downstream | 14417 | 4005805 ~ 4006448 (-) |
| G487884 | NA | other | downstream | 2118593 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 3229456 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 3695149 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 3938770 | 62780 ~ 82095 (-) |
| G488862 | NA | other | upstream | 485940 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 578964 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 1299497 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 2162034 | 6095704 ~ 6194501 (-) |
| G489511 | NA | other | upstream | 2299201 | 6320457 ~ 6327372 (-) |
