Gene
RNA
| Item | Value |
|---|---|
| gene id | G488829 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 4270218 ~ 4270487 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU560826 | True | 270 | lncRNA | 0.41 | 1 | 4270218 | 4270487 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_04086574_04090310 | NA | coding | downstream | 179908 | 4086230 ~ 4090310 (-) |
| CI01000340_03750211_03772917 | NA | coding | downstream | 496302 | 3749935 ~ 3773916 (-) |
| CI01000340_03713291_03747080 | PEX5L, PEX5LA | coding | downstream | 522946 | 3712753 ~ 3747272 (-) |
| CI01000340_03670820_03675367 | NA | coding | downstream | 594851 | 3670713 ~ 3675367 (-) |
| CI01000340_03622734_03659141 | TMEM131 | coding | downstream | 611062 | 3621970 ~ 3659156 (-) |
| CI01000340_04277249_04284722 | NA | coding | upstream | 6652 | 4277139 ~ 4285407 (-) |
| CI01000340_04362537_04371224 | LURAP1 | coding | upstream | 91888 | 4362375 ~ 4371224 (-) |
| CI01000340_04381260_04383972 | TTC4 | coding | upstream | 110597 | 4381084 ~ 4383972 (-) |
| CI01000340_04384950_04386594 | PARS2 | coding | upstream | 114323 | 4384810 ~ 4386594 (-) |
| CI01000340_04403305_04410695 | SGIP1A, SGIP1 | coding | upstream | 132669 | 4403156 ~ 4410695 (-) |
| G488826 | NA | non-coding | downstream | 2346 | 4267656 ~ 4267872 (-) |
| G488573 | NA | non-coding | downstream | 111696 | 4125363 ~ 4158522 (-) |
| G488797 | NA | non-coding | downstream | 196763 | 4073118 ~ 4073455 (-) |
| G488795 | NA | non-coding | downstream | 235839 | 4034146 ~ 4034379 (-) |
| G488794 | NA | non-coding | downstream | 236354 | 4033557 ~ 4033864 (-) |
| G488888 | NA | non-coding | upstream | 417527 | 4688014 ~ 4693632 (-) |
| G488948 | NA | non-coding | upstream | 447093 | 4717580 ~ 4717841 (-) |
| G488950 | NA | non-coding | upstream | 451354 | 4721841 ~ 4722055 (-) |
| G488951 | NA | non-coding | upstream | 452361 | 4722848 ~ 4723114 (-) |
| G488954 | NA | non-coding | upstream | 457199 | 4727686 ~ 4728165 (-) |
| G488782 | NA | other | downstream | 263770 | 4005805 ~ 4006448 (-) |
| G487884 | NA | other | downstream | 2367946 | 1895801 ~ 1902272 (-) |
| CI01000340_00787534_00791061 | NA | other | downstream | 3478809 | 786551 ~ 791409 (-) |
| G485786 | NA | other | downstream | 3944502 | 325334 ~ 325716 (-) |
| CI01000340_00062787_00080635 | NA | other | downstream | 4188123 | 62780 ~ 82095 (-) |
| G488862 | NA | other | upstream | 236709 | 4507196 ~ 4518120 (-) |
| CI01000340_04598932_04627160 | NA | other | upstream | 329733 | 4598714 ~ 4627447 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | upstream | 1050266 | 5320753 ~ 5330215 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 1912803 | 6095704 ~ 6194501 (-) |
| G489511 | NA | other | upstream | 2049970 | 6320457 ~ 6327372 (-) |
