Gene
RNA
| Item | Value |
|---|---|
| gene id | G487498 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 4899887 ~ 4900735 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU559340 | True | 824 | lncRNA | 0.38 | 2 | 4899887 | 4900735 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_04809014_04832590 | JAK1 | coding | upstream | 67297 | 4809014 ~ 4832590 (+) |
| CI01000340_04660938_04668996 | NA | coding | upstream | 230565 | 4659584 ~ 4669322 (+) |
| CI01000340_04564752_04566790 | NA | coding | upstream | 332731 | 4564611 ~ 4567156 (+) |
| CI01000340_04399692_04401164 | NA | coding | upstream | 498427 | 4399419 ~ 4401496 (+) |
| CI01000340_04387653_04393950 | NA | coding | upstream | 505768 | 4387653 ~ 4394119 (+) |
| CI01000340_05105114_05112407 | NA | coding | downstream | 203624 | 5104359 ~ 5112713 (+) |
| CI01000340_05165855_05175759 | NA | coding | downstream | 264511 | 5165246 ~ 5176372 (+) |
| CI01000340_05338225_05385755 | DOCK7 | coding | downstream | 437490 | 5338225 ~ 5385755 (+) |
| CI01000340_05433329_05446428 | KANK4 | coding | downstream | 532594 | 5433329 ~ 5446781 (+) |
| CI01000340_05646434_05651598 | NA | coding | downstream | 744902 | 5645637 ~ 5652345 (+) |
| G487397 | NA | non-coding | upstream | 101664 | 4796811 ~ 4798223 (+) |
| G487470 | NA | non-coding | upstream | 110161 | 4780351 ~ 4789726 (+) |
| G487447 | NA | non-coding | upstream | 171868 | 4727704 ~ 4728019 (+) |
| G487446 | NA | non-coding | upstream | 172551 | 4727105 ~ 4727336 (+) |
| G487445 | NA | non-coding | upstream | 177215 | 4722467 ~ 4722672 (+) |
| G487505 | NA | non-coding | downstream | 8489 | 4909224 ~ 4909874 (+) |
| G487507 | NA | non-coding | downstream | 11544 | 4912279 ~ 4912502 (+) |
| G487580 | NA | non-coding | downstream | 182278 | 5083013 ~ 5083279 (+) |
| G487581 | NA | non-coding | downstream | 188734 | 5089469 ~ 5089673 (+) |
| G487602 | NA | non-coding | downstream | 241708 | 5142443 ~ 5150616 (+) |
| G487133 | NA | other | upstream | 917342 | 3973915 ~ 3982545 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | upstream | 1968087 | 2930635 ~ 2933935 (+) |
| CI01000340_00312480_00313262 | NA | other | upstream | 4586642 | 312212 ~ 313534 (+) |
| G489634 | NA | other | downstream | 1793486 | 6694221 ~ 6700788 (+) |
| G490645 | NA | other | downstream | 4138077 | 9038812 ~ 9043101 (+) |
| G490826 | NA | other | downstream | 4224449 | 9125184 ~ 9131397 (+) |
| G490839 | NA | other | downstream | 4334238 | 9234973 ~ 9237559 (+) |
| G490896 | NA | other | downstream | 4930738 | 9831473 ~ 9845052 (+) |
