Gene
RNA
| Item | Value |
|---|---|
| gene id | G489083 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 5448877 ~ 5449105 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU561086 | True | 229 | lncRNA | 0.35 | 1 | 5448877 | 5449105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_05387790_05394295 | USP1 | coding | downstream | 54432 | 5386989 ~ 5394445 (-) |
| CI01000340_05321995_05329778 | ATG4C | coding | downstream | 118662 | 5320753 ~ 5330215 (-) |
| CI01000340_05196551_05197666 | FOXD3 | coding | downstream | 250592 | 5196128 ~ 5198285 (-) |
| CI01000340_05177681_05192437 | ALG6 | coding | downstream | 256440 | 5177593 ~ 5192437 (-) |
| CI01000340_05153622_05164991 | EFCAB7 | coding | downstream | 283828 | 5153559 ~ 5165049 (-) |
| CI01000340_05450963_05454017 | NA | coding | upstream | 1288 | 5450393 ~ 5455519 (-) |
| CI01000340_05562762_05566332 | NA | coding | upstream | 113511 | 5562616 ~ 5566332 (-) |
| CI01000340_05576979_05643605 | NA | coding | upstream | 127874 | 5576979 ~ 5643605 (-) |
| CI01000340_05717260_05723962 | ADCYAP1R1B | coding | upstream | 267098 | 5716203 ~ 5723962 (-) |
| CI01000340_05739446_05740109 | NA | coding | upstream | 289876 | 5738981 ~ 5742133 (-) |
| G489032 | NA | non-coding | downstream | 165652 | 5282913 ~ 5283225 (-) |
| G489030 | NA | non-coding | downstream | 176592 | 5272060 ~ 5272285 (-) |
| G488878 | NA | non-coding | downstream | 296189 | 5151315 ~ 5152688 (-) |
| G488853 | NA | non-coding | downstream | 316128 | 5090235 ~ 5132749 (-) |
| G488971 | NA | non-coding | downstream | 439884 | 5008653 ~ 5008993 (-) |
| G489108 | NA | non-coding | upstream | 69077 | 5518182 ~ 5519118 (-) |
| G489159 | NA | non-coding | upstream | 217413 | 5666518 ~ 5666834 (-) |
| G489161 | NA | non-coding | upstream | 221426 | 5670531 ~ 5670749 (-) |
| G489162 | NA | non-coding | upstream | 224420 | 5673525 ~ 5673873 (-) |
| G489189 | NA | non-coding | upstream | 307260 | 5756365 ~ 5756630 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 789816 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 852616 | 4507196 ~ 4518120 (-) |
| G488782 | NA | other | downstream | 1442429 | 4005805 ~ 4006448 (-) |
| G487884 | NA | other | downstream | 3546605 | 1895801 ~ 1902272 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 734185 | 6095704 ~ 6194501 (-) |
| G489511 | NA | other | upstream | 871352 | 6320457 ~ 6327372 (-) |
| G491712 | NA | other | upstream | 3350096 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 4572787 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 4908079 | 10356758 ~ 10359856 (-) |
