Gene
RNA
| Item | Value |
|---|---|
| gene id | G489162 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 5673525 ~ 5673873 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU561177 | True | 349 | lncRNA | 0.42 | 1 | 5673525 | 5673873 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_05576979_05643605 | NA | coding | downstream | 29920 | 5576979 ~ 5643605 (-) |
| CI01000340_05562762_05566332 | NA | coding | downstream | 107193 | 5562616 ~ 5566332 (-) |
| CI01000340_05450963_05454017 | NA | coding | downstream | 218006 | 5450393 ~ 5455519 (-) |
| CI01000340_05387790_05394295 | USP1 | coding | downstream | 279080 | 5386989 ~ 5394445 (-) |
| CI01000340_05321995_05329778 | ATG4C | coding | downstream | 343310 | 5320753 ~ 5330215 (-) |
| CI01000340_05717260_05723962 | ADCYAP1R1B | coding | upstream | 42330 | 5716203 ~ 5723962 (-) |
| CI01000340_05739446_05740109 | NA | coding | upstream | 65108 | 5738981 ~ 5742133 (-) |
| CI01000340_05778950_05780358 | NA | coding | upstream | 104988 | 5778861 ~ 5780429 (-) |
| CI01000340_05796381_05802803 | NA | coding | upstream | 122508 | 5796381 ~ 5802803 (-) |
| CI01000340_06068195_06072250 | NA | coding | upstream | 393184 | 6067057 ~ 6072288 (-) |
| G489161 | NA | non-coding | downstream | 2776 | 5670531 ~ 5670749 (-) |
| G489159 | NA | non-coding | downstream | 6691 | 5666518 ~ 5666834 (-) |
| G489108 | NA | non-coding | downstream | 154407 | 5518182 ~ 5519118 (-) |
| G489083 | NA | non-coding | downstream | 224420 | 5448877 ~ 5449105 (-) |
| G489032 | NA | non-coding | downstream | 390300 | 5282913 ~ 5283225 (-) |
| G489189 | NA | non-coding | upstream | 82492 | 5756365 ~ 5756630 (-) |
| G489195 | NA | non-coding | upstream | 107279 | 5781152 ~ 5781883 (-) |
| G489199 | NA | non-coding | upstream | 119912 | 5793785 ~ 5793997 (-) |
| G489458 | NA | non-coding | upstream | 180441 | 5854314 ~ 5854546 (-) |
| G489463 | NA | non-coding | upstream | 200128 | 5874001 ~ 5875300 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 1014464 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 1077264 | 4507196 ~ 4518120 (-) |
| G488782 | NA | other | downstream | 1667077 | 4005805 ~ 4006448 (-) |
| G487884 | NA | other | downstream | 3771253 | 1895801 ~ 1902272 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | upstream | 509417 | 6095704 ~ 6194501 (-) |
| G489511 | NA | other | upstream | 646584 | 6320457 ~ 6327372 (-) |
| G491712 | NA | other | upstream | 3125328 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 4348019 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 4683311 | 10356758 ~ 10359856 (-) |
