Gene
RNA
| Item | Value |
|---|---|
| gene id | G487799 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 5739517 ~ 5748252 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU559679 | True | 1061 | lncRNA | 0.44 | 2 | 5739517 | 5748252 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_05697468_05705929 | GHRHRB | coding | upstream | 32617 | 5697317 ~ 5706900 (+) |
| CI01000340_05646434_05651598 | NA | coding | upstream | 87172 | 5645637 ~ 5652345 (+) |
| CI01000340_05433329_05446428 | KANK4 | coding | upstream | 292736 | 5433329 ~ 5446781 (+) |
| CI01000340_05338225_05385755 | DOCK7 | coding | upstream | 353762 | 5338225 ~ 5385755 (+) |
| CI01000340_05165855_05175759 | NA | coding | upstream | 563145 | 5165246 ~ 5176372 (+) |
| CI01000340_05781697_05792066 | POMGNT1, MGC81332, POMGNT1.S | coding | downstream | 32600 | 5780852 ~ 5792678 (+) |
| CI01000340_05875022_05877021 | NA | coding | downstream | 126335 | 5874587 ~ 5877298 (+) |
| CI01000340_05942559_05948192 | NA | coding | downstream | 193724 | 5941976 ~ 5949268 (+) |
| CI01000340_05967007_05972445 | NA | coding | downstream | 218464 | 5966716 ~ 5972589 (+) |
| CI01000340_06033435_06039832 | PIK3R3B, PIK3R3 | coding | downstream | 284005 | 6032257 ~ 6039849 (+) |
| G487775 | NA | non-coding | upstream | 69355 | 5656014 ~ 5670162 (+) |
| G487724 | NA | non-coding | upstream | 132788 | 5588446 ~ 5606729 (+) |
| G487709 | NA | non-coding | upstream | 165534 | 5543796 ~ 5573983 (+) |
| G487658 | NA | non-coding | upstream | 514817 | 5224326 ~ 5224700 (+) |
| G487638 | NA | non-coding | upstream | 586553 | 5152490 ~ 5152964 (+) |
| G487808 | NA | non-coding | downstream | 8132 | 5756384 ~ 5756606 (+) |
| G487812 | NA | non-coding | downstream | 14328 | 5762580 ~ 5762813 (+) |
| G487814 | NA | non-coding | downstream | 16571 | 5764823 ~ 5770886 (+) |
| G489237 | NA | non-coding | downstream | 81062 | 5829314 ~ 5829540 (+) |
| G489235 | NA | non-coding | downstream | 81531 | 5829783 ~ 5829993 (+) |
| CI01000340_04660938_04668996 | NA | other | upstream | 1074332 | 4659584 ~ 4669322 (+) |
| CI01000340_04399692_04401164 | NA | other | upstream | 1338021 | 4399419 ~ 4401496 (+) |
| G487133 | NA | other | upstream | 1756972 | 3973915 ~ 3982545 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | upstream | 2807717 | 2930635 ~ 2933935 (+) |
| CI01000340_00312480_00313262 | NA | other | upstream | 5426272 | 312212 ~ 313534 (+) |
| G489634 | NA | other | downstream | 945969 | 6694221 ~ 6700788 (+) |
| G490645 | NA | other | downstream | 3290560 | 9038812 ~ 9043101 (+) |
| G490826 | NA | other | downstream | 3376932 | 9125184 ~ 9131397 (+) |
| G490839 | NA | other | downstream | 3486721 | 9234973 ~ 9237559 (+) |
| G490896 | NA | other | downstream | 4083221 | 9831473 ~ 9845052 (+) |
