G487808


Basic Information

Item Value
gene id G487808
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 5756384 ~ 5756606 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU559689
AGTGTCAAATTTTCACGGTTTATTACACATAAACGTTCAAATACACACACAGTTATGTCAAAATGCCCGTCTTGGCGTATATTCGCGTTGGTTATGTGAATGTGAACAGCATGTGTAACAGCATATTGTCTCCGTCCATTAGGTCTTAGTGACAGCAGCCTTTAAAACATGCTACTGTCTACTATTGGCTGTCTGTATTATAAATGATAATCAAACAACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU559689 True 223 lncRNA 0.37 1 5756384 5756606

Neighbor

gene id symbol gene type direction distance location
CI01000340_05697468_05705929 GHRHRB coding upstream 49484 5697317 ~ 5706900 (+)
CI01000340_05646434_05651598 NA coding upstream 104039 5645637 ~ 5652345 (+)
CI01000340_05433329_05446428 KANK4 coding upstream 309603 5433329 ~ 5446781 (+)
CI01000340_05338225_05385755 DOCK7 coding upstream 370629 5338225 ~ 5385755 (+)
CI01000340_05165855_05175759 NA coding upstream 580012 5165246 ~ 5176372 (+)
CI01000340_05781697_05792066 POMGNT1, MGC81332, POMGNT1.S coding downstream 24246 5780852 ~ 5792678 (+)
CI01000340_05875022_05877021 NA coding downstream 117981 5874587 ~ 5877298 (+)
CI01000340_05942559_05948192 NA coding downstream 185370 5941976 ~ 5949268 (+)
CI01000340_05967007_05972445 NA coding downstream 210110 5966716 ~ 5972589 (+)
CI01000340_06033435_06039832 PIK3R3B, PIK3R3 coding downstream 275651 6032257 ~ 6039849 (+)
G487799 NA non-coding upstream 8132 5739517 ~ 5748252 (+)
G487775 NA non-coding upstream 86222 5656014 ~ 5670162 (+)
G487724 NA non-coding upstream 149655 5588446 ~ 5606729 (+)
G487709 NA non-coding upstream 182401 5543796 ~ 5573983 (+)
G487658 NA non-coding upstream 531684 5224326 ~ 5224700 (+)
G487812 NA non-coding downstream 5974 5762580 ~ 5762813 (+)
G487814 NA non-coding downstream 8217 5764823 ~ 5770886 (+)
G489237 NA non-coding downstream 72708 5829314 ~ 5829540 (+)
G489235 NA non-coding downstream 73177 5829783 ~ 5829993 (+)
G489228 NA non-coding downstream 129408 5886014 ~ 5906995 (+)
CI01000340_04660938_04668996 NA other upstream 1091199 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 1354888 4399419 ~ 4401496 (+)
G487133 NA other upstream 1773839 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 2824584 2930635 ~ 2933935 (+)
CI01000340_00312480_00313262 NA other upstream 5443139 312212 ~ 313534 (+)
G489634 NA other downstream 937615 6694221 ~ 6700788 (+)
G490645 NA other downstream 3282206 9038812 ~ 9043101 (+)
G490826 NA other downstream 3368578 9125184 ~ 9131397 (+)
G490839 NA other downstream 3478367 9234973 ~ 9237559 (+)
G490896 NA other downstream 4074867 9831473 ~ 9845052 (+)

Expression


Co-expression Network