G487814


Basic Information

Item Value
gene id G487814
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 5764823 ~ 5770886 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU559695
TATGCATATTAGACATTCATGAGAACGTGTGCCCATATAATCTTAGTGTAAGTGGTAAACAGATTTGGCTTGCTGTCTGCTATAGAGGGGCTCGGAGAGGATATTCTACTCGAGCTCCGATTGCCCCCCTATAACAGGCAAAATTGTACAAAAAGGAGGAGGAGGGATGCCAAAAGAACAACAAGAAGAGTAATGTCATTGACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU559695 True 206 lncRNA 0.43 2 5764823 5770886

Neighbor

gene id symbol gene type direction distance location
CI01000340_05697468_05705929 GHRHRB coding upstream 57923 5697317 ~ 5706900 (+)
CI01000340_05646434_05651598 NA coding upstream 112478 5645637 ~ 5652345 (+)
CI01000340_05433329_05446428 KANK4 coding upstream 318042 5433329 ~ 5446781 (+)
CI01000340_05338225_05385755 DOCK7 coding upstream 379068 5338225 ~ 5385755 (+)
CI01000340_05165855_05175759 NA coding upstream 588451 5165246 ~ 5176372 (+)
CI01000340_05781697_05792066 POMGNT1, MGC81332, POMGNT1.S coding downstream 9966 5780852 ~ 5792678 (+)
CI01000340_05875022_05877021 NA coding downstream 103701 5874587 ~ 5877298 (+)
CI01000340_05942559_05948192 NA coding downstream 171090 5941976 ~ 5949268 (+)
CI01000340_05967007_05972445 NA coding downstream 195830 5966716 ~ 5972589 (+)
CI01000340_06033435_06039832 PIK3R3B, PIK3R3 coding downstream 261371 6032257 ~ 6039849 (+)
G487812 NA non-coding upstream 2010 5762580 ~ 5762813 (+)
G487808 NA non-coding upstream 8217 5756384 ~ 5756606 (+)
G487799 NA non-coding upstream 16571 5739517 ~ 5748252 (+)
G487775 NA non-coding upstream 94661 5656014 ~ 5670162 (+)
G487724 NA non-coding upstream 158094 5588446 ~ 5606729 (+)
G489237 NA non-coding downstream 58428 5829314 ~ 5829540 (+)
G489235 NA non-coding downstream 58897 5829783 ~ 5829993 (+)
G489228 NA non-coding downstream 115128 5886014 ~ 5906995 (+)
G489230 NA non-coding downstream 227041 5997927 ~ 6000707 (+)
G489229 NA non-coding downstream 230065 6000951 ~ 6010551 (+)
CI01000340_04660938_04668996 NA other upstream 1099638 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 1363327 4399419 ~ 4401496 (+)
G487133 NA other upstream 1782278 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 2833023 2930635 ~ 2933935 (+)
CI01000340_00312480_00313262 NA other upstream 5451578 312212 ~ 313534 (+)
G489634 NA other downstream 923335 6694221 ~ 6700788 (+)
G490645 NA other downstream 3267926 9038812 ~ 9043101 (+)
G490826 NA other downstream 3354298 9125184 ~ 9131397 (+)
G490839 NA other downstream 3464087 9234973 ~ 9237559 (+)
G490896 NA other downstream 4060587 9831473 ~ 9845052 (+)

Expression


Co-expression Network