Gene
RNA
| Item | Value |
|---|---|
| gene id | G489199 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 5793785 ~ 5793997 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU561220 | True | 213 | lncRNA | 0.34 | 1 | 5793785 | 5793997 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_05778950_05780358 | NA | coding | downstream | 13356 | 5778861 ~ 5780429 (-) |
| CI01000340_05739446_05740109 | NA | coding | downstream | 51652 | 5738981 ~ 5742133 (-) |
| CI01000340_05717260_05723962 | ADCYAP1R1B | coding | downstream | 69823 | 5716203 ~ 5723962 (-) |
| CI01000340_05576979_05643605 | NA | coding | downstream | 150180 | 5576979 ~ 5643605 (-) |
| CI01000340_05562762_05566332 | NA | coding | downstream | 227453 | 5562616 ~ 5566332 (-) |
| CI01000340_05796381_05802803 | NA | coding | upstream | 2384 | 5796381 ~ 5802803 (-) |
| CI01000340_06068195_06072250 | NA | coding | upstream | 273060 | 6067057 ~ 6072288 (-) |
| CI01000340_06095704_06194498 | MAST2 | coding | upstream | 301707 | 6095704 ~ 6194501 (-) |
| CI01000340_06222356_06224576 | TMEM69 | coding | upstream | 428047 | 6222044 ~ 6224576 (-) |
| CI01000340_06248419_06255089 | NASP | coding | upstream | 453403 | 6247400 ~ 6255165 (-) |
| G489195 | NA | non-coding | downstream | 11902 | 5781152 ~ 5781883 (-) |
| G489189 | NA | non-coding | downstream | 37155 | 5756365 ~ 5756630 (-) |
| G489162 | NA | non-coding | downstream | 119912 | 5673525 ~ 5673873 (-) |
| G489161 | NA | non-coding | downstream | 123036 | 5670531 ~ 5670749 (-) |
| G489159 | NA | non-coding | downstream | 126951 | 5666518 ~ 5666834 (-) |
| G489458 | NA | non-coding | upstream | 60317 | 5854314 ~ 5854546 (-) |
| G489463 | NA | non-coding | upstream | 80004 | 5874001 ~ 5875300 (-) |
| G489472 | NA | non-coding | upstream | 89394 | 5883391 ~ 5885424 (-) |
| G489486 | NA | non-coding | upstream | 114418 | 5908415 ~ 5910422 (-) |
| G489461 | NA | non-coding | upstream | 148460 | 5942457 ~ 5944002 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 468641 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 1134724 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 1197524 | 4507196 ~ 4518120 (-) |
| G488782 | NA | other | downstream | 1787337 | 4005805 ~ 4006448 (-) |
| G487884 | NA | other | downstream | 3891513 | 1895801 ~ 1902272 (-) |
| G489511 | NA | other | upstream | 526460 | 6320457 ~ 6327372 (-) |
| G491712 | NA | other | upstream | 3005204 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 4227895 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 4563187 | 10356758 ~ 10359856 (-) |
