Gene
RNA
| Item | Value |
|---|---|
| gene id | G489254 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 6097974 ~ 6098288 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU561281 | True | 216 | lncRNA | 0.56 | 2 | 6097974 | 6098288 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_06033435_06039832 | PIK3R3B, PIK3R3 | coding | upstream | 58125 | 6032257 ~ 6039849 (+) |
| CI01000340_05967007_05972445 | NA | coding | upstream | 125385 | 5966716 ~ 5972589 (+) |
| CI01000340_05942559_05948192 | NA | coding | upstream | 148706 | 5941976 ~ 5949268 (+) |
| CI01000340_05875022_05877021 | NA | coding | upstream | 220676 | 5874587 ~ 5877298 (+) |
| CI01000340_05781697_05792066 | POMGNT1, MGC81332, POMGNT1.S | coding | upstream | 305296 | 5780852 ~ 5792678 (+) |
| CI01000340_06227847_06235507 | GPBP1L1 | coding | downstream | 129559 | 6227847 ~ 6235903 (+) |
| CI01000340_06237715_06245533 | NA | coding | downstream | 139427 | 6237715 ~ 6245762 (+) |
| CI01000340_06264637_06276320 | ORC1 | coding | downstream | 166349 | 6264637 ~ 6276803 (+) |
| CI01000340_06326491_06326891 | NA | coding | downstream | 228203 | 6326491 ~ 6327145 (+) |
| CI01000340_06327907_06340628 | AP1M3 | coding | downstream | 229198 | 6327486 ~ 6340644 (+) |
| G489281 | NA | non-coding | upstream | 10917 | 6086686 ~ 6087057 (+) |
| G489274 | NA | non-coding | upstream | 20731 | 6077011 ~ 6077243 (+) |
| G489271 | NA | non-coding | upstream | 24031 | 6073741 ~ 6073943 (+) |
| G489229 | NA | non-coding | upstream | 87423 | 6000951 ~ 6010551 (+) |
| G489230 | NA | non-coding | upstream | 97267 | 5997927 ~ 6000707 (+) |
| G489329 | NA | non-coding | downstream | 72149 | 6170437 ~ 6170693 (+) |
| G489330 | NA | non-coding | downstream | 72444 | 6170732 ~ 6170962 (+) |
| G489331 | NA | non-coding | downstream | 73347 | 6171635 ~ 6171936 (+) |
| G489333 | NA | non-coding | downstream | 76725 | 6175013 ~ 6175396 (+) |
| G489379 | NA | non-coding | downstream | 172678 | 6270966 ~ 6285308 (+) |
| CI01000340_04660938_04668996 | NA | other | upstream | 1432789 | 4659584 ~ 4669322 (+) |
| CI01000340_04399692_04401164 | NA | other | upstream | 1696478 | 4399419 ~ 4401496 (+) |
| G487133 | NA | other | upstream | 2115429 | 3973915 ~ 3982545 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | upstream | 3166174 | 2930635 ~ 2933935 (+) |
| CI01000340_00312480_00313262 | NA | other | upstream | 5784729 | 312212 ~ 313534 (+) |
| G489634 | NA | other | downstream | 595933 | 6694221 ~ 6700788 (+) |
| G490645 | NA | other | downstream | 2940524 | 9038812 ~ 9043101 (+) |
| G490826 | NA | other | downstream | 3026896 | 9125184 ~ 9131397 (+) |
| G490839 | NA | other | downstream | 3136685 | 9234973 ~ 9237559 (+) |
| G490896 | NA | other | downstream | 3733185 | 9831473 ~ 9845052 (+) |
