Gene
RNA
| Item | Value |
|---|---|
| gene id | G489860 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 6622617 ~ 6623001 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU561950 | True | 385 | lncRNA | 0.36 | 1 | 6622617 | 6623001 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_06503908_06507226 | NA | coding | downstream | 114409 | 6503765 ~ 6508208 (-) |
| CI01000340_06470405_06482135 | NA | coding | downstream | 139437 | 6469146 ~ 6483180 (-) |
| CI01000340_06406898_06410323 | DMRT2B | coding | downstream | 211379 | 6405499 ~ 6411238 (-) |
| CI01000340_06374920_06376111 | FAM183A | coding | downstream | 244772 | 6374811 ~ 6377845 (-) |
| CI01000340_06345631_06346302 | TMEM125 | coding | downstream | 275057 | 6345613 ~ 6347560 (-) |
| CI01000340_06628894_06640081 | NA | coding | upstream | 5868 | 6628869 ~ 6640081 (-) |
| CI01000340_06642326_06648797 | NA | coding | upstream | 17948 | 6640949 ~ 6648797 (-) |
| CI01000340_06695274_06700680 | SERBP1A, SERBP1 | coding | upstream | 71684 | 6694685 ~ 6701455 (-) |
| CI01000340_06704533_06711160 | NA | coding | upstream | 80629 | 6703630 ~ 6711160 (-) |
| CI01000340_06713482_06725854 | DDR2, DDR2A | coding | upstream | 90200 | 6713201 ~ 6725854 (-) |
| G489813 | NA | non-coding | downstream | 77908 | 6541318 ~ 6544709 (-) |
| G489826 | NA | non-coding | downstream | 84423 | 6535443 ~ 6538194 (-) |
| G489623 | NA | non-coding | downstream | 197619 | 6424703 ~ 6424998 (-) |
| G489622 | NA | non-coding | downstream | 202081 | 6420250 ~ 6420536 (-) |
| G489619 | NA | non-coding | downstream | 204640 | 6417185 ~ 6417977 (-) |
| G489861 | NA | non-coding | upstream | 107 | 6623108 ~ 6623631 (-) |
| G489862 | NA | non-coding | upstream | 2952 | 6625953 ~ 6626228 (-) |
| G489825 | NA | non-coding | upstream | 26659 | 6649660 ~ 6649895 (-) |
| G489875 | NA | non-coding | upstream | 47675 | 6670676 ~ 6671097 (-) |
| G489897 | NA | non-coding | upstream | 154796 | 6777797 ~ 6780846 (-) |
| G489511 | NA | other | downstream | 295245 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 401975 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 1297473 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 1963556 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 2026356 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 2176200 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 3398891 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 3734183 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 5050745 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 5444176 | 12067177 ~ 12116900 (-) |
