Item | Value |
---|---|
gene id | G489897 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000340 |
NCBI id | null |
chromosome length | 19571558 |
location | 6777797 ~ 6780846 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU561999 | False | 3024 | lncRNA | 0.35 | 2 | 6777797 | 6780846 |
TU562000 | False | 3027 | lncRNA | 0.35 | 2 | 6777797 | 6780846 |
TU562003 | False | 3029 | lncRNA | 0.35 | 2 | 6777797 | 6780846 |
TU562004 | True | 3027 | lncRNA | 0.35 | 2 | 6777797 | 6780846 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000340_06755244_06767885 | UAP1 | coding | downstream | 9912 | 6755244 ~ 6767885 (-) |
CI01000340_06713482_06725854 | DDR2, DDR2A | coding | downstream | 51943 | 6713201 ~ 6725854 (-) |
CI01000340_06704533_06711160 | NA | coding | downstream | 66637 | 6703630 ~ 6711160 (-) |
CI01000340_06695274_06700680 | SERBP1A, SERBP1 | coding | downstream | 76342 | 6694685 ~ 6701455 (-) |
CI01000340_06642326_06648797 | NA | coding | downstream | 129000 | 6640949 ~ 6648797 (-) |
CI01000340_06795551_06907442 | NOS1AP, C1H1ORF226, C18H1ORF226, C6H1ORF226 | coding | upstream | 14705 | 6795551 ~ 6907442 (-) |
CI01000340_06943742_06951136 | RGS5, RGS5A | coding | upstream | 162896 | 6943742 ~ 6951322 (-) |
CI01000340_06967769_06969169 | RGS16 | coding | upstream | 186156 | 6967002 ~ 6969208 (-) |
CI01000340_06980994_06986987 | RGS8 | coding | upstream | 200077 | 6980923 ~ 6988414 (-) |
CI01000340_07094782_07128154 | BRINP3A.1 | coding | upstream | 313645 | 7094491 ~ 7128242 (-) |
G489875 | NA | non-coding | downstream | 106700 | 6670676 ~ 6671097 (-) |
G489825 | NA | non-coding | downstream | 127902 | 6649660 ~ 6649895 (-) |
G489862 | NA | non-coding | downstream | 151569 | 6625953 ~ 6626228 (-) |
G489861 | NA | non-coding | downstream | 154166 | 6623108 ~ 6623631 (-) |
G489860 | NA | non-coding | downstream | 154796 | 6622617 ~ 6623001 (-) |
G489930 | NA | non-coding | upstream | 151778 | 6932624 ~ 6933194 (-) |
G489934 | NA | non-coding | upstream | 189400 | 6970246 ~ 6970577 (-) |
G489940 | NA | non-coding | upstream | 195849 | 6976695 ~ 6976932 (-) |
G489975 | NA | non-coding | upstream | 243969 | 7024815 ~ 7025051 (-) |
G489979 | NA | non-coding | upstream | 248141 | 7028987 ~ 7029255 (-) |
G489511 | NA | other | downstream | 450425 | 6320457 ~ 6327372 (-) |
CI01000340_06095704_06194498 | MAST2 | other | downstream | 557155 | 6095704 ~ 6194501 (-) |
CI01000340_05321995_05329778 | ATG4C | other | downstream | 1452653 | 5320753 ~ 5330215 (-) |
CI01000340_04598932_04627160 | NA | other | downstream | 2118736 | 4598714 ~ 4627447 (-) |
G488862 | NA | other | downstream | 2181536 | 4507196 ~ 4518120 (-) |
G491712 | NA | other | upstream | 2018355 | 8799201 ~ 8799577 (-) |
CI01000340_10025958_10028902 | SRSF3 | other | upstream | 3241046 | 10025656 ~ 10029589 (-) |
CI01000340_10357202_10357606 | NA | other | upstream | 3576338 | 10356758 ~ 10359856 (-) |
G493109 | NA | other | upstream | 4892900 | 11673746 ~ 11677994 (-) |
G493266 | NA | other | upstream | 5286331 | 12067177 ~ 12116900 (-) |