Gene
RNA
| Item | Value |
|---|---|
| gene id | G489940 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 6976695 ~ 6976932 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562049 | True | 238 | lncRNA | 0.42 | 1 | 6976695 | 6976932 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_06967769_06969169 | RGS16 | coding | downstream | 7487 | 6967002 ~ 6969208 (-) |
| CI01000340_06943742_06951136 | RGS5, RGS5A | coding | downstream | 25373 | 6943742 ~ 6951322 (-) |
| CI01000340_06795551_06907442 | NOS1AP, C1H1ORF226, C18H1ORF226, C6H1ORF226 | coding | downstream | 69253 | 6795551 ~ 6907442 (-) |
| CI01000340_06755244_06767885 | UAP1 | coding | downstream | 208810 | 6755244 ~ 6767885 (-) |
| CI01000340_06713482_06725854 | DDR2, DDR2A | coding | downstream | 250841 | 6713201 ~ 6725854 (-) |
| CI01000340_06980994_06986987 | RGS8 | coding | upstream | 3991 | 6980923 ~ 6988414 (-) |
| CI01000340_07094782_07128154 | BRINP3A.1 | coding | upstream | 117559 | 7094491 ~ 7128242 (-) |
| CI01000340_07316270_07338395 | BRINP3A.2, BRINP3 | coding | upstream | 338519 | 7315451 ~ 7339343 (-) |
| CI01000340_07347497_07355645 | NA | coding | upstream | 369888 | 7346820 ~ 7356850 (-) |
| CI01000340_07543307_07544545 | HES1, HER6 | coding | upstream | 566087 | 7543019 ~ 7544752 (-) |
| G489934 | NA | non-coding | downstream | 6118 | 6970246 ~ 6970577 (-) |
| G489930 | NA | non-coding | downstream | 43501 | 6932624 ~ 6933194 (-) |
| G489897 | NA | non-coding | downstream | 195849 | 6777797 ~ 6780846 (-) |
| G489875 | NA | non-coding | downstream | 305598 | 6670676 ~ 6671097 (-) |
| G489825 | NA | non-coding | downstream | 326800 | 6649660 ~ 6649895 (-) |
| G489975 | NA | non-coding | upstream | 47883 | 7024815 ~ 7025051 (-) |
| G489979 | NA | non-coding | upstream | 52055 | 7028987 ~ 7029255 (-) |
| G490119 | NA | non-coding | upstream | 90008 | 7066940 ~ 7067314 (-) |
| G490101 | NA | non-coding | upstream | 107413 | 7084345 ~ 7084699 (-) |
| G490126 | NA | non-coding | upstream | 154509 | 7131441 ~ 7131700 (-) |
| G489511 | NA | other | downstream | 649323 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 756053 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 1651551 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 2317634 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 2380434 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 1822269 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 3044960 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 3380252 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 4696814 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 5090245 | 12067177 ~ 12116900 (-) |
