G489766


Basic Information

Item Value
gene id G489766
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 6995363 ~ 6995684 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU561843
CTTTAACAGTTTTGTTCCTAAAGTGTCAGGTTGTGGAGTGCTGCAGTGTAACCAATACATCCATTCACAGACAATGAGATTCTCAAATGTAAACATAGAAAATCTCGCAAAATCTCTTGCAGTCAAACGTGACTTCACAGTAAACAAACATGGCACACAATGGGCATGAAGAAATGGCGATAATAGTGTTTACGGGGAAAAAAAGAAAAAGATTTGGATAAAGTCGTGTTATACTTCTGTCTTCTGTCAGCTCGATTTCTGATTTGGTATCATTTTGTTTTCACATGACAATCTAAAGAGTGCATACGCATTTGTAGTCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU561843 True 322 lncRNA 0.38 1 6995363 6995684

Neighbor

gene id symbol gene type direction distance location
CI01000340_06927893_06929574 NA coding upstream 65690 6927788 ~ 6929673 (+)
CI01000340_06769655_06778207 UHMK1 coding upstream 217156 6769655 ~ 6778207 (+)
CI01000340_06702811_06703207 NA coding upstream 291932 6702811 ~ 6703903 (+)
CI01000340_06677894_06691556 IL12RB2 coding upstream 303794 6677894 ~ 6691569 (+)
CI01000340_06656187_06669677 NA coding upstream 323894 6656022 ~ 6671469 (+)
CI01000340_07451476_07454866 RHCG, RHCGL1 coding downstream 455690 7451374 ~ 7455412 (+)
CI01000340_07482030_07483694 NA coding downstream 486346 7482030 ~ 7483902 (+)
CI01000340_07486593_07487826 NA coding downstream 490793 7486477 ~ 7487826 (+)
CI01000340_07641488_07649078 NA coding downstream 645462 7641146 ~ 7649494 (+)
CI01000340_07692812_07697115 TMEM45A coding downstream 697128 7692812 ~ 7697333 (+)
G489763 NA non-coding upstream 6595 6985994 ~ 6988768 (+)
G489759 NA non-coding upstream 16243 6978871 ~ 6979120 (+)
G489748 NA non-coding upstream 42926 6952200 ~ 6952437 (+)
G489744 NA non-coding upstream 62170 6932626 ~ 6933193 (+)
G489740 NA non-coding upstream 71200 6923927 ~ 6924163 (+)
G489950 NA non-coding downstream 6619 7002303 ~ 7002824 (+)
G489956 NA non-coding downstream 18034 7013718 ~ 7014346 (+)
G489978 NA non-coding downstream 33208 7028892 ~ 7029208 (+)
G489985 NA non-coding downstream 38945 7034629 ~ 7034959 (+)
G489984 NA non-coding downstream 39960 7035644 ~ 7035842 (+)
G489634 NA other upstream 294575 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 2330178 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 2593867 4399419 ~ 4401496 (+)
G487133 NA other upstream 3012818 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 4063563 2930635 ~ 2933935 (+)
G490645 NA other downstream 2043128 9038812 ~ 9043101 (+)
G490826 NA other downstream 2129500 9125184 ~ 9131397 (+)
G490839 NA other downstream 2239289 9234973 ~ 9237559 (+)
G490896 NA other downstream 2835789 9831473 ~ 9845052 (+)
G492194 NA other downstream 3655999 10651683 ~ 10652694 (+)

Expression


Co-expression Network