Gene
RNA
| Item | Value |
|---|---|
| gene id | G490119 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7066940 ~ 7067314 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562252 | True | 375 | lncRNA | 0.43 | 1 | 7066940 | 7067314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_06980994_06986987 | RGS8 | coding | downstream | 78526 | 6980923 ~ 6988414 (-) |
| CI01000340_06967769_06969169 | RGS16 | coding | downstream | 97732 | 6967002 ~ 6969208 (-) |
| CI01000340_06943742_06951136 | RGS5, RGS5A | coding | downstream | 115618 | 6943742 ~ 6951322 (-) |
| CI01000340_06795551_06907442 | NOS1AP, C1H1ORF226, C18H1ORF226, C6H1ORF226 | coding | downstream | 159498 | 6795551 ~ 6907442 (-) |
| CI01000340_06755244_06767885 | UAP1 | coding | downstream | 299055 | 6755244 ~ 6767885 (-) |
| CI01000340_07094782_07128154 | BRINP3A.1 | coding | upstream | 27177 | 7094491 ~ 7128242 (-) |
| CI01000340_07316270_07338395 | BRINP3A.2, BRINP3 | coding | upstream | 248137 | 7315451 ~ 7339343 (-) |
| CI01000340_07347497_07355645 | NA | coding | upstream | 279506 | 7346820 ~ 7356850 (-) |
| CI01000340_07543307_07544545 | HES1, HER6 | coding | upstream | 475705 | 7543019 ~ 7544752 (-) |
| CI01000340_07546144_07547567 | NA | coding | upstream | 478365 | 7545679 ~ 7547567 (-) |
| G489979 | NA | non-coding | downstream | 37685 | 7028987 ~ 7029255 (-) |
| G489975 | NA | non-coding | downstream | 41889 | 7024815 ~ 7025051 (-) |
| G489940 | NA | non-coding | downstream | 90008 | 6976695 ~ 6976932 (-) |
| G489934 | NA | non-coding | downstream | 96363 | 6970246 ~ 6970577 (-) |
| G489930 | NA | non-coding | downstream | 133746 | 6932624 ~ 6933194 (-) |
| G490101 | NA | non-coding | upstream | 17031 | 7084345 ~ 7084699 (-) |
| G490126 | NA | non-coding | upstream | 64127 | 7131441 ~ 7131700 (-) |
| G490130 | NA | non-coding | upstream | 79058 | 7146372 ~ 7146610 (-) |
| G490132 | NA | non-coding | upstream | 81645 | 7148959 ~ 7149301 (-) |
| G490134 | NA | non-coding | upstream | 86184 | 7153498 ~ 7153779 (-) |
| G489511 | NA | other | downstream | 739568 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 846298 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 1741796 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 2407879 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 2470679 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 1731887 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 2954578 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 3289870 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 4606432 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 4999863 | 12067177 ~ 12116900 (-) |
