G490181


Basic Information

Item Value
gene id G490181
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 7248217 ~ 7248424 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU562314
CACACACTTAAAGATTTTAAGCTAGATTTTGGGCCCGATTTGCAACCCCCCAACGATCTGGGGGGTGTAGCGTGATCCGAGGCTTCTTGCAACCAACTTTTTGTCCAAAAAATTCTCAATTGTGTGGCGTTATTACTATTATGTTACTGCTCCCAGTGGTGTTAGAGCGTGCACGATCCCAAATCATGAATATCAAATGTGATAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU562314 True 208 lncRNA 0.43 1 7248217 7248424

Neighbor

gene id symbol gene type direction distance location
CI01000340_06927893_06929574 NA coding upstream 318544 6927788 ~ 6929673 (+)
CI01000340_06769655_06778207 UHMK1 coding upstream 470010 6769655 ~ 6778207 (+)
CI01000340_06702811_06703207 NA coding upstream 544786 6702811 ~ 6703903 (+)
CI01000340_06677894_06691556 IL12RB2 coding upstream 556648 6677894 ~ 6691569 (+)
CI01000340_06656187_06669677 NA coding upstream 576748 6656022 ~ 6671469 (+)
CI01000340_07451476_07454866 RHCG, RHCGL1 coding downstream 202950 7451374 ~ 7455412 (+)
CI01000340_07482030_07483694 NA coding downstream 233606 7482030 ~ 7483902 (+)
CI01000340_07486593_07487826 NA coding downstream 238053 7486477 ~ 7487826 (+)
CI01000340_07641488_07649078 NA coding downstream 392722 7641146 ~ 7649494 (+)
CI01000340_07692812_07697115 TMEM45A coding downstream 444388 7692812 ~ 7697333 (+)
G490045 NA non-coding upstream 94694 7153294 ~ 7153523 (+)
G490013 NA non-coding upstream 156084 7091867 ~ 7092133 (+)
G490008 NA non-coding upstream 162919 7084977 ~ 7085298 (+)
G489984 NA non-coding upstream 212375 7035644 ~ 7035842 (+)
G489985 NA non-coding upstream 213258 7034629 ~ 7034959 (+)
G490294 NA non-coding downstream 246255 7494679 ~ 7495208 (+)
G490290 NA non-coding downstream 248018 7496442 ~ 7502162 (+)
G490347 NA non-coding downstream 269942 7518366 ~ 7518584 (+)
G490353 NA non-coding downstream 284056 7532480 ~ 7532700 (+)
G490361 NA non-coding downstream 304190 7552614 ~ 7553152 (+)
G489634 NA other upstream 547429 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 2583032 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 2846721 4399419 ~ 4401496 (+)
G487133 NA other upstream 3265672 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 4316417 2930635 ~ 2933935 (+)
G490645 NA other downstream 1790388 9038812 ~ 9043101 (+)
G490826 NA other downstream 1876760 9125184 ~ 9131397 (+)
G490839 NA other downstream 1986549 9234973 ~ 9237559 (+)
G490896 NA other downstream 2583049 9831473 ~ 9845052 (+)
G492194 NA other downstream 3403259 10651683 ~ 10652694 (+)

Expression


Co-expression Network