Gene
RNA
| Item | Value |
|---|---|
| gene id | G491147 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7415410 ~ 7415669 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU563423 | True | 260 | lncRNA | 0.58 | 1 | 7415410 | 7415669 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07347497_07355645 | NA | coding | downstream | 58560 | 7346820 ~ 7356850 (-) |
| CI01000340_07316270_07338395 | BRINP3A.2, BRINP3 | coding | downstream | 76067 | 7315451 ~ 7339343 (-) |
| CI01000340_07094782_07128154 | BRINP3A.1 | coding | downstream | 287168 | 7094491 ~ 7128242 (-) |
| CI01000340_06980994_06986987 | RGS8 | coding | downstream | 426996 | 6980923 ~ 6988414 (-) |
| CI01000340_06967769_06969169 | RGS16 | coding | downstream | 446202 | 6967002 ~ 6969208 (-) |
| CI01000340_07543307_07544545 | HES1, HER6 | coding | upstream | 127350 | 7543019 ~ 7544752 (-) |
| CI01000340_07546144_07547567 | NA | coding | upstream | 130010 | 7545679 ~ 7547567 (-) |
| CI01000340_07651745_07673195 | OPA1 | coding | upstream | 235319 | 7650988 ~ 7673671 (-) |
| CI01000340_07778322_07787234 | NA | coding | upstream | 362074 | 7777743 ~ 7787463 (-) |
| CI01000340_07994499_07999442 | CTH, CGL | coding | upstream | 578830 | 7994499 ~ 7999651 (-) |
| G490215 | NA | non-coding | downstream | 112358 | 7265768 ~ 7303052 (-) |
| G490134 | NA | non-coding | downstream | 261631 | 7153498 ~ 7153779 (-) |
| G490132 | NA | non-coding | downstream | 266109 | 7148959 ~ 7149301 (-) |
| G490130 | NA | non-coding | downstream | 268800 | 7146372 ~ 7146610 (-) |
| G490126 | NA | non-coding | downstream | 283710 | 7131441 ~ 7131700 (-) |
| G491154 | NA | non-coding | upstream | 23155 | 7438824 ~ 7439035 (-) |
| G491168 | NA | non-coding | upstream | 35484 | 7451153 ~ 7456580 (-) |
| G491179 | NA | non-coding | upstream | 70779 | 7486448 ~ 7488082 (-) |
| G491180 | NA | non-coding | upstream | 89080 | 7504749 ~ 7504955 (-) |
| G491183 | NA | non-coding | upstream | 93310 | 7508979 ~ 7509190 (-) |
| G489511 | NA | other | downstream | 1088038 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 1194768 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 2090266 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 2756349 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 2819149 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 1383532 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 2606223 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 2941515 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 4258077 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 4651508 | 12067177 ~ 12116900 (-) |
