Gene
RNA
| Item | Value |
|---|---|
| gene id | G491154 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7438824 ~ 7439035 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU563430 | True | 212 | lncRNA | 0.48 | 1 | 7438824 | 7439035 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07347497_07355645 | NA | coding | downstream | 81974 | 7346820 ~ 7356850 (-) |
| CI01000340_07316270_07338395 | BRINP3A.2, BRINP3 | coding | downstream | 99481 | 7315451 ~ 7339343 (-) |
| CI01000340_07094782_07128154 | BRINP3A.1 | coding | downstream | 310582 | 7094491 ~ 7128242 (-) |
| CI01000340_06980994_06986987 | RGS8 | coding | downstream | 450410 | 6980923 ~ 6988414 (-) |
| CI01000340_06967769_06969169 | RGS16 | coding | downstream | 469616 | 6967002 ~ 6969208 (-) |
| CI01000340_07543307_07544545 | HES1, HER6 | coding | upstream | 103984 | 7543019 ~ 7544752 (-) |
| CI01000340_07546144_07547567 | NA | coding | upstream | 106644 | 7545679 ~ 7547567 (-) |
| CI01000340_07651745_07673195 | OPA1 | coding | upstream | 211953 | 7650988 ~ 7673671 (-) |
| CI01000340_07778322_07787234 | NA | coding | upstream | 338708 | 7777743 ~ 7787463 (-) |
| CI01000340_07994499_07999442 | CTH, CGL | coding | upstream | 555464 | 7994499 ~ 7999651 (-) |
| G491147 | NA | non-coding | downstream | 23155 | 7415410 ~ 7415669 (-) |
| G490215 | NA | non-coding | downstream | 135772 | 7265768 ~ 7303052 (-) |
| G490134 | NA | non-coding | downstream | 285045 | 7153498 ~ 7153779 (-) |
| G490132 | NA | non-coding | downstream | 289523 | 7148959 ~ 7149301 (-) |
| G490130 | NA | non-coding | downstream | 292214 | 7146372 ~ 7146610 (-) |
| G491168 | NA | non-coding | upstream | 12118 | 7451153 ~ 7456580 (-) |
| G491179 | NA | non-coding | upstream | 47413 | 7486448 ~ 7488082 (-) |
| G491180 | NA | non-coding | upstream | 65714 | 7504749 ~ 7504955 (-) |
| G491183 | NA | non-coding | upstream | 69944 | 7508979 ~ 7509190 (-) |
| G491203 | NA | non-coding | upstream | 90775 | 7529810 ~ 7530032 (-) |
| G489511 | NA | other | downstream | 1111452 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 1218182 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 2113680 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 2779763 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 2842563 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 1360166 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 2582857 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 2918149 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 4234711 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 4628142 | 12067177 ~ 12116900 (-) |
