Gene
RNA
| Item | Value |
|---|---|
| gene id | G490294 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7494679 ~ 7495208 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562435 | True | 530 | lncRNA | 0.39 | 1 | 7494679 | 7495208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07486593_07487826 | NA | coding | upstream | 6853 | 7486477 ~ 7487826 (+) |
| CI01000340_07482030_07483694 | NA | coding | upstream | 10777 | 7482030 ~ 7483902 (+) |
| CI01000340_07451476_07454866 | RHCG, RHCGL1 | coding | upstream | 39267 | 7451374 ~ 7455412 (+) |
| CI01000340_06927893_06929574 | NA | coding | upstream | 565006 | 6927788 ~ 6929673 (+) |
| CI01000340_06769655_06778207 | UHMK1 | coding | upstream | 716472 | 6769655 ~ 6778207 (+) |
| CI01000340_07641488_07649078 | NA | coding | downstream | 145938 | 7641146 ~ 7649494 (+) |
| CI01000340_07692812_07697115 | TMEM45A | coding | downstream | 197604 | 7692812 ~ 7697333 (+) |
| CI01000340_07698442_07700739 | NA | coding | downstream | 203234 | 7698442 ~ 7700739 (+) |
| CI01000340_07701724_07717637 | CHD1L | coding | downstream | 206178 | 7701386 ~ 7717852 (+) |
| CI01000340_07721395_07728614 | TRAF3IP2L | coding | downstream | 226187 | 7721395 ~ 7728752 (+) |
| G490181 | NA | non-coding | upstream | 246255 | 7248217 ~ 7248424 (+) |
| G490045 | NA | non-coding | upstream | 341156 | 7153294 ~ 7153523 (+) |
| G490013 | NA | non-coding | upstream | 402546 | 7091867 ~ 7092133 (+) |
| G490008 | NA | non-coding | upstream | 409381 | 7084977 ~ 7085298 (+) |
| G489984 | NA | non-coding | upstream | 458837 | 7035644 ~ 7035842 (+) |
| G490290 | NA | non-coding | downstream | 1234 | 7496442 ~ 7502162 (+) |
| G490347 | NA | non-coding | downstream | 23158 | 7518366 ~ 7518584 (+) |
| G490353 | NA | non-coding | downstream | 37272 | 7532480 ~ 7532700 (+) |
| G490361 | NA | non-coding | downstream | 57406 | 7552614 ~ 7553152 (+) |
| G490370 | NA | non-coding | downstream | 70417 | 7565625 ~ 7565860 (+) |
| G489634 | NA | other | upstream | 793891 | 6694221 ~ 6700788 (+) |
| CI01000340_04660938_04668996 | NA | other | upstream | 2829494 | 4659584 ~ 4669322 (+) |
| CI01000340_04399692_04401164 | NA | other | upstream | 3093183 | 4399419 ~ 4401496 (+) |
| G487133 | NA | other | upstream | 3512134 | 3973915 ~ 3982545 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | upstream | 4562879 | 2930635 ~ 2933935 (+) |
| G490645 | NA | other | downstream | 1543604 | 9038812 ~ 9043101 (+) |
| G490826 | NA | other | downstream | 1629976 | 9125184 ~ 9131397 (+) |
| G490839 | NA | other | downstream | 1739765 | 9234973 ~ 9237559 (+) |
| G490896 | NA | other | downstream | 2336265 | 9831473 ~ 9845052 (+) |
| G492194 | NA | other | downstream | 3156475 | 10651683 ~ 10652694 (+) |
