G490353


Basic Information

Item Value
gene id G490353
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 7532480 ~ 7532700 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU562494
CCGATGACTCAGTGAGCTCCATTGCCAGCAAGATAATTAACACTTTCAGATGCCCAGAAAGCTACTAAAGACATATTTAAAACAGTTCATGTGACTACAGTGGTTCAACCTTAATGTTATTAAGTGATGAGAATACTTTTCGTGCGCCAAAAAAACCCAAAATAACGACTTTATTCAACAATATCTAGTGATGGCCGATTTCAAAACACAGCCTAATGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU562494 True 221 lncRNA 0.37 1 7532480 7532700

Neighbor

gene id symbol gene type direction distance location
CI01000340_07486593_07487826 NA coding upstream 44654 7486477 ~ 7487826 (+)
CI01000340_07482030_07483694 NA coding upstream 48578 7482030 ~ 7483902 (+)
CI01000340_07451476_07454866 RHCG, RHCGL1 coding upstream 77068 7451374 ~ 7455412 (+)
CI01000340_06927893_06929574 NA coding upstream 602807 6927788 ~ 6929673 (+)
CI01000340_06769655_06778207 UHMK1 coding upstream 754273 6769655 ~ 6778207 (+)
CI01000340_07641488_07649078 NA coding downstream 108446 7641146 ~ 7649494 (+)
CI01000340_07692812_07697115 TMEM45A coding downstream 160112 7692812 ~ 7697333 (+)
CI01000340_07698442_07700739 NA coding downstream 165742 7698442 ~ 7700739 (+)
CI01000340_07701724_07717637 CHD1L coding downstream 168686 7701386 ~ 7717852 (+)
CI01000340_07721395_07728614 TRAF3IP2L coding downstream 188695 7721395 ~ 7728752 (+)
G490347 NA non-coding upstream 13896 7518366 ~ 7518584 (+)
G490290 NA non-coding upstream 30318 7496442 ~ 7502162 (+)
G490294 NA non-coding upstream 37272 7494679 ~ 7495208 (+)
G490181 NA non-coding upstream 284056 7248217 ~ 7248424 (+)
G490045 NA non-coding upstream 378957 7153294 ~ 7153523 (+)
G490361 NA non-coding downstream 19914 7552614 ~ 7553152 (+)
G490370 NA non-coding downstream 32925 7565625 ~ 7565860 (+)
G490377 NA non-coding downstream 43586 7576286 ~ 7576575 (+)
G490398 NA non-coding downstream 85716 7618416 ~ 7618638 (+)
G490399 NA non-coding downstream 87526 7620226 ~ 7620474 (+)
G489634 NA other upstream 831692 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 2867295 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 3130984 4399419 ~ 4401496 (+)
G487133 NA other upstream 3549935 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 4600680 2930635 ~ 2933935 (+)
G490645 NA other downstream 1506112 9038812 ~ 9043101 (+)
G490826 NA other downstream 1592484 9125184 ~ 9131397 (+)
G490839 NA other downstream 1702273 9234973 ~ 9237559 (+)
G490896 NA other downstream 2298773 9831473 ~ 9845052 (+)
G492194 NA other downstream 3118983 10651683 ~ 10652694 (+)

Expression


Co-expression Network