Gene
RNA
| Item | Value |
|---|---|
| gene id | G490399 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7620226 ~ 7620474 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562550 | True | 249 | lncRNA | 0.33 | 1 | 7620226 | 7620474 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07486593_07487826 | NA | coding | upstream | 132400 | 7486477 ~ 7487826 (+) |
| CI01000340_07482030_07483694 | NA | coding | upstream | 136324 | 7482030 ~ 7483902 (+) |
| CI01000340_07451476_07454866 | RHCG, RHCGL1 | coding | upstream | 164814 | 7451374 ~ 7455412 (+) |
| CI01000340_06927893_06929574 | NA | coding | upstream | 690553 | 6927788 ~ 6929673 (+) |
| CI01000340_06769655_06778207 | UHMK1 | coding | upstream | 842019 | 6769655 ~ 6778207 (+) |
| CI01000340_07641488_07649078 | NA | coding | downstream | 20672 | 7641146 ~ 7649494 (+) |
| CI01000340_07692812_07697115 | TMEM45A | coding | downstream | 72338 | 7692812 ~ 7697333 (+) |
| CI01000340_07698442_07700739 | NA | coding | downstream | 77968 | 7698442 ~ 7700739 (+) |
| CI01000340_07701724_07717637 | CHD1L | coding | downstream | 80912 | 7701386 ~ 7717852 (+) |
| CI01000340_07721395_07728614 | TRAF3IP2L | coding | downstream | 100921 | 7721395 ~ 7728752 (+) |
| G490398 | NA | non-coding | upstream | 1588 | 7618416 ~ 7618638 (+) |
| G490377 | NA | non-coding | upstream | 43651 | 7576286 ~ 7576575 (+) |
| G490370 | NA | non-coding | upstream | 54366 | 7565625 ~ 7565860 (+) |
| G490361 | NA | non-coding | upstream | 67074 | 7552614 ~ 7553152 (+) |
| G490353 | NA | non-coding | upstream | 87526 | 7532480 ~ 7532700 (+) |
| G490401 | NA | non-coding | downstream | 12280 | 7632754 ~ 7632973 (+) |
| G490289 | NA | non-coding | downstream | 50950 | 7671424 ~ 7672360 (+) |
| G490417 | NA | non-coding | downstream | 54581 | 7675055 ~ 7675269 (+) |
| G490448 | NA | non-coding | downstream | 111544 | 7732018 ~ 7732811 (+) |
| G490482 | NA | non-coding | downstream | 122906 | 7743380 ~ 7743594 (+) |
| G489634 | NA | other | upstream | 919438 | 6694221 ~ 6700788 (+) |
| CI01000340_04660938_04668996 | NA | other | upstream | 2955041 | 4659584 ~ 4669322 (+) |
| CI01000340_04399692_04401164 | NA | other | upstream | 3218730 | 4399419 ~ 4401496 (+) |
| G487133 | NA | other | upstream | 3637681 | 3973915 ~ 3982545 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | upstream | 4688426 | 2930635 ~ 2933935 (+) |
| G490645 | NA | other | downstream | 1418338 | 9038812 ~ 9043101 (+) |
| G490826 | NA | other | downstream | 1504710 | 9125184 ~ 9131397 (+) |
| G490839 | NA | other | downstream | 1614499 | 9234973 ~ 9237559 (+) |
| G490896 | NA | other | downstream | 2210999 | 9831473 ~ 9845052 (+) |
| G492194 | NA | other | downstream | 3031209 | 10651683 ~ 10652694 (+) |
