Gene
RNA
| Item | Value |
|---|---|
| gene id | G490401 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7632754 ~ 7632973 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU562552 | True | 220 | lncRNA | 0.47 | 1 | 7632754 | 7632973 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07486593_07487826 | NA | coding | upstream | 144928 | 7486477 ~ 7487826 (+) |
| CI01000340_07482030_07483694 | NA | coding | upstream | 148852 | 7482030 ~ 7483902 (+) |
| CI01000340_07451476_07454866 | RHCG, RHCGL1 | coding | upstream | 177342 | 7451374 ~ 7455412 (+) |
| CI01000340_06927893_06929574 | NA | coding | upstream | 703081 | 6927788 ~ 6929673 (+) |
| CI01000340_06769655_06778207 | UHMK1 | coding | upstream | 854547 | 6769655 ~ 6778207 (+) |
| CI01000340_07641488_07649078 | NA | coding | downstream | 8173 | 7641146 ~ 7649494 (+) |
| CI01000340_07692812_07697115 | TMEM45A | coding | downstream | 59839 | 7692812 ~ 7697333 (+) |
| CI01000340_07698442_07700739 | NA | coding | downstream | 65469 | 7698442 ~ 7700739 (+) |
| CI01000340_07701724_07717637 | CHD1L | coding | downstream | 68413 | 7701386 ~ 7717852 (+) |
| CI01000340_07721395_07728614 | TRAF3IP2L | coding | downstream | 88422 | 7721395 ~ 7728752 (+) |
| G490399 | NA | non-coding | upstream | 12280 | 7620226 ~ 7620474 (+) |
| G490398 | NA | non-coding | upstream | 14116 | 7618416 ~ 7618638 (+) |
| G490377 | NA | non-coding | upstream | 56179 | 7576286 ~ 7576575 (+) |
| G490370 | NA | non-coding | upstream | 66894 | 7565625 ~ 7565860 (+) |
| G490361 | NA | non-coding | upstream | 79602 | 7552614 ~ 7553152 (+) |
| G490289 | NA | non-coding | downstream | 38451 | 7671424 ~ 7672360 (+) |
| G490417 | NA | non-coding | downstream | 42082 | 7675055 ~ 7675269 (+) |
| G490448 | NA | non-coding | downstream | 99045 | 7732018 ~ 7732811 (+) |
| G490482 | NA | non-coding | downstream | 110407 | 7743380 ~ 7743594 (+) |
| G490466 | NA | non-coding | downstream | 114697 | 7747670 ~ 7823029 (+) |
| G489634 | NA | other | upstream | 931966 | 6694221 ~ 6700788 (+) |
| CI01000340_04660938_04668996 | NA | other | upstream | 2967569 | 4659584 ~ 4669322 (+) |
| CI01000340_04399692_04401164 | NA | other | upstream | 3231258 | 4399419 ~ 4401496 (+) |
| G487133 | NA | other | upstream | 3650209 | 3973915 ~ 3982545 (+) |
| CI01000340_02930635_02933799 | LSM2 | other | upstream | 4700954 | 2930635 ~ 2933935 (+) |
| G490645 | NA | other | downstream | 1405839 | 9038812 ~ 9043101 (+) |
| G490826 | NA | other | downstream | 1492211 | 9125184 ~ 9131397 (+) |
| G490839 | NA | other | downstream | 1602000 | 9234973 ~ 9237559 (+) |
| G490896 | NA | other | downstream | 2198500 | 9831473 ~ 9845052 (+) |
| G492194 | NA | other | downstream | 3018710 | 10651683 ~ 10652694 (+) |
