Gene
RNA
| Item | Value |
|---|---|
| gene id | G491362 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7854076 ~ 7855024 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU563654 | True | 630 | lncRNA | 0.34 | 2 | 7854076 | 7855024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07778322_07787234 | NA | coding | downstream | 66613 | 7777743 ~ 7787463 (-) |
| CI01000340_07651745_07673195 | OPA1 | coding | downstream | 180405 | 7650988 ~ 7673671 (-) |
| CI01000340_07546144_07547567 | NA | coding | downstream | 306509 | 7545679 ~ 7547567 (-) |
| CI01000340_07543307_07544545 | HES1, HER6 | coding | downstream | 309324 | 7543019 ~ 7544752 (-) |
| CI01000340_07347497_07355645 | NA | coding | downstream | 497226 | 7346820 ~ 7356850 (-) |
| CI01000340_07994499_07999442 | CTH, CGL | coding | upstream | 139475 | 7994499 ~ 7999651 (-) |
| CI01000340_08007878_08016645 | CTH | coding | upstream | 152673 | 8007697 ~ 8017282 (-) |
| CI01000340_08020667_08025048 | NIT2 | coding | upstream | 165431 | 8020455 ~ 8025048 (-) |
| CI01000340_08029268_08031877 | NA | coding | upstream | 174058 | 8029082 ~ 8032004 (-) |
| CI01000340_08036162_08043659 | PLCXD1 | coding | upstream | 180304 | 8035328 ~ 8044456 (-) |
| G491355 | NA | non-coding | downstream | 12955 | 7840193 ~ 7841121 (-) |
| G491325 | NA | non-coding | downstream | 45900 | 7782920 ~ 7808176 (-) |
| G491216 | NA | non-coding | downstream | 120572 | 7731846 ~ 7733504 (-) |
| G491299 | NA | non-coding | downstream | 151370 | 7701612 ~ 7702706 (-) |
| G491363 | NA | non-coding | upstream | 198 | 7855222 ~ 7855849 (-) |
| G491391 | NA | non-coding | upstream | 32900 | 7887924 ~ 7888971 (-) |
| G491392 | NA | non-coding | upstream | 35229 | 7890253 ~ 7892742 (-) |
| G491393 | NA | non-coding | upstream | 37785 | 7892809 ~ 7894303 (-) |
| G491394 | NA | non-coding | upstream | 40569 | 7895593 ~ 7895796 (-) |
| G489511 | NA | other | downstream | 1526704 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 1633434 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 2528932 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 3195015 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 3257815 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 944177 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 2166868 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 2502160 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 3818722 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 4212153 | 12067177 ~ 12116900 (-) |
