Gene
RNA
| Item | Value |
|---|---|
| gene id | G491402 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7917965 ~ 7918199 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU563697 | True | 235 | lncRNA | 0.32 | 1 | 7917965 | 7918199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07778322_07787234 | NA | coding | downstream | 130502 | 7777743 ~ 7787463 (-) |
| CI01000340_07651745_07673195 | OPA1 | coding | downstream | 244294 | 7650988 ~ 7673671 (-) |
| CI01000340_07546144_07547567 | NA | coding | downstream | 370398 | 7545679 ~ 7547567 (-) |
| CI01000340_07543307_07544545 | HES1, HER6 | coding | downstream | 373213 | 7543019 ~ 7544752 (-) |
| CI01000340_07347497_07355645 | NA | coding | downstream | 561115 | 7346820 ~ 7356850 (-) |
| CI01000340_07994499_07999442 | CTH, CGL | coding | upstream | 76300 | 7994499 ~ 7999651 (-) |
| CI01000340_08007878_08016645 | CTH | coding | upstream | 89498 | 8007697 ~ 8017282 (-) |
| CI01000340_08020667_08025048 | NIT2 | coding | upstream | 102256 | 8020455 ~ 8025048 (-) |
| CI01000340_08029268_08031877 | NA | coding | upstream | 110883 | 8029082 ~ 8032004 (-) |
| CI01000340_08036162_08043659 | PLCXD1 | coding | upstream | 117129 | 8035328 ~ 8044456 (-) |
| G491396 | NA | non-coding | downstream | 3782 | 7896916 ~ 7914183 (-) |
| G491394 | NA | non-coding | downstream | 22169 | 7895593 ~ 7895796 (-) |
| G491393 | NA | non-coding | downstream | 23662 | 7892809 ~ 7894303 (-) |
| G491392 | NA | non-coding | downstream | 25223 | 7890253 ~ 7892742 (-) |
| G491391 | NA | non-coding | downstream | 28994 | 7887924 ~ 7888971 (-) |
| G491410 | NA | non-coding | upstream | 14595 | 7932794 ~ 7933015 (-) |
| G491415 | NA | non-coding | upstream | 23342 | 7941541 ~ 7941835 (-) |
| G491417 | NA | non-coding | upstream | 25686 | 7943885 ~ 7944146 (-) |
| G491427 | NA | non-coding | upstream | 28175 | 7946374 ~ 7946634 (-) |
| G489511 | NA | other | downstream | 1590593 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 1697323 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 2592821 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 3258904 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 3321704 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 881002 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 2103693 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 2438985 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 3755547 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 4148978 | 12067177 ~ 12116900 (-) |
