Gene
RNA
| Item | Value |
|---|---|
| gene id | G491427 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 7946374 ~ 7946634 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU563728 | True | 261 | lncRNA | 0.29 | 1 | 7946374 | 7946634 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_07778322_07787234 | NA | coding | downstream | 158911 | 7777743 ~ 7787463 (-) |
| CI01000340_07651745_07673195 | OPA1 | coding | downstream | 272703 | 7650988 ~ 7673671 (-) |
| CI01000340_07546144_07547567 | NA | coding | downstream | 398807 | 7545679 ~ 7547567 (-) |
| CI01000340_07543307_07544545 | HES1, HER6 | coding | downstream | 401622 | 7543019 ~ 7544752 (-) |
| CI01000340_07347497_07355645 | NA | coding | downstream | 589524 | 7346820 ~ 7356850 (-) |
| CI01000340_07994499_07999442 | CTH, CGL | coding | upstream | 47865 | 7994499 ~ 7999651 (-) |
| CI01000340_08007878_08016645 | CTH | coding | upstream | 61063 | 8007697 ~ 8017282 (-) |
| CI01000340_08020667_08025048 | NIT2 | coding | upstream | 73821 | 8020455 ~ 8025048 (-) |
| CI01000340_08029268_08031877 | NA | coding | upstream | 82448 | 8029082 ~ 8032004 (-) |
| CI01000340_08036162_08043659 | PLCXD1 | coding | upstream | 88694 | 8035328 ~ 8044456 (-) |
| G491417 | NA | non-coding | downstream | 2228 | 7943885 ~ 7944146 (-) |
| G491415 | NA | non-coding | downstream | 4539 | 7941541 ~ 7941835 (-) |
| G491410 | NA | non-coding | downstream | 13359 | 7932794 ~ 7933015 (-) |
| G491402 | NA | non-coding | downstream | 28175 | 7917965 ~ 7918199 (-) |
| G491396 | NA | non-coding | downstream | 32191 | 7896916 ~ 7914183 (-) |
| G491448 | NA | non-coding | upstream | 170927 | 8117561 ~ 8119786 (-) |
| G491475 | NA | non-coding | upstream | 182268 | 8128902 ~ 8130505 (-) |
| G491471 | NA | non-coding | upstream | 238662 | 8185296 ~ 8185607 (-) |
| G491565 | NA | non-coding | upstream | 485977 | 8432611 ~ 8435645 (-) |
| G489511 | NA | other | downstream | 1619002 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 1725732 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 2621230 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 3287313 | 4598714 ~ 4627447 (-) |
| G488862 | NA | other | downstream | 3350113 | 4507196 ~ 4518120 (-) |
| G491712 | NA | other | upstream | 852567 | 8799201 ~ 8799577 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 2075258 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 2410550 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 3727112 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 4120543 | 12067177 ~ 12116900 (-) |
