G491712


Basic Information

Item Value
gene id G491712
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 8799201 ~ 8799577 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564040
GGCCACAGGTGTATAAAATCAAGCACCTAGGCATGCAGACTGCTTCTACAAACATTTGTGAAAGAATGGGTTGCTCTCAGGAGCTCAGTGAATTCAAGCGTGGTACCATGATAGGTTGCCATCTGTGCAATAAGTCCATTTGTGAAATTTCCTCACTACTAAATATTCCACGGTCAACTGTTAGTGGTATCATAACAAAGTGGAAGCAATTGGGAACAACAGCAACTCAGCCACGAAGTGGTAGGCCACGTAAAATCACAGAGCGGGGTCAGCGCATGCTGAGGCACACAGTGTGCAGAAGTCGCCAACTTTCTGCAGAGTCAATAGCTACAGACCTCCAAACTTCGTGTGGCCTTCAGATTAGCTCAAGAACAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564040 True 377 TUCP 0.46 1 8799201 8799577

Neighbor

gene id symbol gene type direction distance location
CI01000340_08780601_08789689 NA coding downstream 9407 8780601 ~ 8789794 (-)
CI01000340_08722460_08728762 CNGA3, CNGA3A coding downstream 69195 8721652 ~ 8730006 (-)
CI01000340_08513697_08528196 NA coding downstream 270559 8513494 ~ 8528642 (-)
CI01000340_08502336_08507603 NA coding downstream 290068 8502245 ~ 8509133 (-)
CI01000340_08374101_08387155 GABRG3 coding downstream 411652 8374079 ~ 8387549 (-)
CI01000340_08808101_08822062 VDRALPHA, VDR, VDR0, VDRA, VDRB coding upstream 7372 8806949 ~ 8822062 (-)
CI01000340_08864647_08868868 NA coding upstream 64761 8864338 ~ 8868868 (-)
CI01000340_08875220_08879004 PRSS60.2 coding upstream 75588 8875165 ~ 8879053 (-)
CI01000340_08914198_08926239 STAT2 coding upstream 113830 8913407 ~ 8926239 (-)
CI01000340_08928445_08929680 NA coding upstream 128012 8927589 ~ 8929680 (-)
G491687 NA non-coding downstream 129272 8669613 ~ 8669929 (-)
G491565 NA non-coding downstream 363556 8432611 ~ 8435645 (-)
G491471 NA non-coding downstream 613594 8185296 ~ 8185607 (-)
G491475 NA non-coding downstream 668696 8128902 ~ 8130505 (-)
G491448 NA non-coding downstream 679415 8117561 ~ 8119786 (-)
G491658 NA non-coding upstream 4138 8803715 ~ 8806687 (-)
G491724 NA non-coding upstream 80816 8880393 ~ 8880664 (-)
G491725 NA non-coding upstream 83016 8882593 ~ 8883395 (-)
G491726 NA non-coding upstream 84251 8883828 ~ 8884263 (-)
G491764 NA non-coding upstream 237774 9037351 ~ 9037613 (-)
G489511 NA other downstream 2471829 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 2578559 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 3474057 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 4140140 4598714 ~ 4627447 (-)
G488862 NA other downstream 4202940 4507196 ~ 4518120 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 1222315 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 1557607 10356758 ~ 10359856 (-)
G493109 NA other upstream 2874169 11673746 ~ 11677994 (-)
G493266 NA other upstream 3267600 12067177 ~ 12116900 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other upstream 3812639 12577435 ~ 12625758 (-)

Expression


Co-expression Network