G490762


Basic Information

Item Value
gene id G490762
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 8909939 ~ 8910270 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU562946
CAATGATCCAAAACAAACATCAAAACCAACACAAAAATGTGTCACTAAGCACAAAATTAAGCTTCTGCCATGGCCATCCCAGTCCCCTGACCTGAACCCTAAAGAAAATGAGTGGGGTGAACTGAAGAGAAGAAGCACCAACATGGAGCTGGGAATCTGAAGGATCTGGAAAGATTCTGCATGAAGGAATGGTCTCTGATCTCTTGTCACGTGTTCTCCAAACTCATCAGGCATTATAGGTGAAGACTCAGAGCTGTTATCTTGGCAAAAGGAGGTTGCAAAAAGTATTGAATAAAAGGGTGCCAATAATTGTGGCCAACATGTTTTGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU562946 True 332 lncRNA 0.42 1 8909939 8910270

Neighbor

gene id symbol gene type direction distance location
CI01000340_08905333_08906557 GPR84 coding upstream 1938 8905333 ~ 8908001 (+)
CI01000340_08895637_08897909 PRSS60.2 coding upstream 11649 8895370 ~ 8898290 (+)
CI01000340_08882602_08883850 PRSS60.1, PRSS60.2 coding upstream 26089 8882602 ~ 8883850 (+)
CI01000340_08774019_08777325 SLC48A1B, SLC48A1 coding upstream 131637 8773837 ~ 8778302 (+)
CI01000340_08763694_08772208 BIN2B coding upstream 137142 8762472 ~ 8772797 (+)
CI01000340_08938200_08942073 NA coding downstream 27882 8938152 ~ 8942624 (+)
CI01000340_08970483_08982079 B4GN1, B4GALNT1B, B4GALNT1 coding downstream 60172 8970442 ~ 8983411 (+)
CI01000340_08999872_09005509 NA coding downstream 89168 8999438 ~ 9005984 (+)
CI01000340_09053887_09057663 NA coding downstream 143617 9053887 ~ 9057663 (+)
CI01000340_09064514_09065350 NA coding downstream 153901 9064171 ~ 9066523 (+)
G490759 NA non-coding upstream 8156 8901571 ~ 8901783 (+)
G490746 NA non-coding upstream 46570 8863105 ~ 8863369 (+)
G490745 NA non-coding upstream 46854 8862784 ~ 8863085 (+)
G490739 NA non-coding upstream 49422 8860199 ~ 8860517 (+)
G490742 NA non-coding upstream 50697 8859009 ~ 8859242 (+)
G490648 NA non-coding downstream 80880 8991150 ~ 9016552 (+)
G490800 NA non-coding downstream 141732 9052002 ~ 9052146 (+)
G490823 NA non-coding downstream 208339 9118609 ~ 9119265 (+)
G490829 NA non-coding downstream 253896 9164166 ~ 9164806 (+)
G490808 NA non-coding downstream 267574 9177844 ~ 9218507 (+)
G489634 NA other upstream 2209151 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 4244754 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 4508443 4399419 ~ 4401496 (+)
G487133 NA other upstream 4927394 3973915 ~ 3982545 (+)
CI01000340_02930635_02933799 LSM2 other upstream 5978139 2930635 ~ 2933935 (+)
G490645 NA other downstream 128542 9038812 ~ 9043101 (+)
G490826 NA other downstream 214914 9125184 ~ 9131397 (+)
G490839 NA other downstream 324703 9234973 ~ 9237559 (+)
G490896 NA other downstream 921203 9831473 ~ 9845052 (+)
G492194 NA other downstream 1741413 10651683 ~ 10652694 (+)

Expression


Co-expression Network