G490914


Basic Information

Item Value
gene id G490914
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9741668 ~ 9742721 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU563120
TTTTTGGGTGAACTAACCCTTTAAACCACAGTTGAGTCAAAATTAGGCTTTTGAAGCTTAAATGGGTGAATTCCATTGAGTTTATAAATTTGAAGAAAAAATATAGTTATGTGCCCTAGTGAAAGTTCAATAAATTAAAAAGGCAAAAGAGTAACATAAGTGATGCAAAAACTTAAGAAAATGAGATCCAGGCAGTCCAGCAATGATTATGTCAGAGATCAAATTTAAATAAGGAATAACAAATTTATTAATAACAAACAAATGAATTAAGTAATTAATAGTTAATAATAAAATCTAGAGTACTGTATCTAATAGATGAAGATGAAGATCAGAATATAGAGAAAGAAAGAACAAAATTAAGACATTTGCAGAATGAAATGAGAGGTAGGAGAGAAGAAGCAGAAGCAGAAGATGCAGAAGAGATGCGAGGAGCAAAAAGAGCAAAGAAAAAGGAAAGAAAAGCTAAACTATCAAAGACCCAGTCCGTTTTATACCATAAGCACAGGAAAACTTACATCCCACTCAAACTTATGTTTTGGTCTAATAAGAAAATGTCAAACAAATGTATCCATTATGTCATAGTTGGGGTAATGGCTAGGTCAGAGTGACTGGTCAAATGTCAAAAATAGATGAAAATAGATATAGGGGTTGTTTTGACACCCTTAAGGGAATTTTGCAGATCTTACATTATCACATGTCTGAAGAAATGGAAACAGACATATTTTGATATAAAAGGTACATCAAATTCAAATGAGCAACTAATTCTGAAAACACCATCGCTTCTGCAGTACTTGGCAGGCGTCCAATATCTAACCACAAACGTGTCAACACAACCTGTCACATTGGAACACTTTGAAGAACAATTGAATATACATACTCTTAAAGATAAAAGAAGAATAACCATAAATCTACATTAAAGATTAAATACTTGAAAAGATGATGAGGATTAACATATGGAGTAGGAGTACGTGAATATATGAAATCAAATGTAATATTGATAAATCATAAGCCATAAATGATTAACATAAAATATGAATAAAATGAAAGAATATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU563120 True 1054 lncRNA 0.31 1 9741668 9742721

Neighbor

gene id symbol gene type direction distance location
CI01000340_09730645_09739635 SLC6A11A coding upstream 2033 9730524 ~ 9739635 (+)
CI01000340_09712859_09717865 FRS3 coding upstream 23770 9712859 ~ 9717898 (+)
CI01000340_09691816_09701552 CF125, UQCC2 coding upstream 40071 9691775 ~ 9701597 (+)
CI01000340_09688037_09689981 NA coding upstream 51422 9688037 ~ 9690246 (+)
CI01000340_09684020_09686723 DDI2 coding upstream 54915 9683499 ~ 9686753 (+)
CI01000340_09751682_09758397 ENO1B, ENO1, ENO1A, ENOA coding downstream 8961 9751682 ~ 9758677 (+)
CI01000340_09760651_09770907 REREB coding downstream 17930 9760651 ~ 9770907 (+)
CI01000340_09792107_09793316 NA coding downstream 49386 9792107 ~ 9793808 (+)
CI01000340_09800166_09810314 SLC26A6L coding downstream 56766 9799487 ~ 9810368 (+)
CI01000340_09854550_09859638 NA coding downstream 111829 9854550 ~ 9859905 (+)
G491052 NA non-coding upstream 8633 9732358 ~ 9733035 (+)
G491032 NA non-coding upstream 116450 9624858 ~ 9625218 (+)
G491031 NA non-coding upstream 118627 9620240 ~ 9623041 (+)
G491023 NA non-coding upstream 165386 9576072 ~ 9576282 (+)
G491022 NA non-coding upstream 166700 9574731 ~ 9574968 (+)
G490857 NA non-coding downstream 107814 9850535 ~ 9851679 (+)
G491067 NA non-coding downstream 119270 9861991 ~ 9862216 (+)
G491075 NA non-coding downstream 157187 9899908 ~ 9900145 (+)
G491080 NA non-coding downstream 184093 9926814 ~ 9927267 (+)
G491079 NA non-coding downstream 186661 9929382 ~ 9929697 (+)
G490839 NA other upstream 504109 9234973 ~ 9237559 (+)
G490826 NA other upstream 610271 9125184 ~ 9131397 (+)
G490645 NA other upstream 698567 9038812 ~ 9043101 (+)
G489634 NA other upstream 3040880 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 5076483 4659584 ~ 4669322 (+)
G490896 NA other downstream 88752 9831473 ~ 9845052 (+)
G492194 NA other downstream 908962 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 1040681 10781468 ~ 10787792 (+)
G492847 NA other downstream 1866385 11609106 ~ 11696961 (+)
G493617 NA other downstream 3312671 13055392 ~ 13069652 (+)

Expression


Co-expression Network