G491983


Basic Information

Item Value
gene id G491983
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9867049 ~ 9867353 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564347
TGACAGAAATGCAAATGTTGCTGTGCGGTTAAAAAAGTTATTCCAAGTTTATCCAGCGTGTTTTCCCCAAGTGTTGTTTTCTTGAATATCTTAAATATAAGCCTAAATGATTAAGTACAGCTATGACAGCGTGAACGTAAATGACTATATAATATTAGCCTAAGTCAGGAGTTCGCGTGTCTGACGCGTGTGACTTGAGCTGTTTGAGAGTCACTGGCAGCGGTGTGACACCTCCCCGCTTTCAAGGGGATGCGCGCGAGCGATGCCCTCAAAGATAAAAATCTCGCGCGTGCAAATACCACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564347 True 305 lncRNA 0.44 1 9867049 9867353

Neighbor

gene id symbol gene type direction distance location
CI01000340_09847205_09851609 BRAFLDRAFT_215305, ARPC4 coding downstream 15087 9846802 ~ 9851962 (-)
CI01000340_09833384_09843244 MMYHEMB1, MYHB, MYHM86-1 coding downstream 23424 9833303 ~ 9843625 (-)
CI01000340_09817874_09828387 MMYHEMB1, MYH3, MYH1, MYH8, MYHB, MYH13 coding downstream 38061 9817794 ~ 9828988 (-)
CI01000340_09811189_09815649 P4HTM coding downstream 51400 9810571 ~ 9815649 (-)
CI01000340_09794255_09797190 KBTBD12 coding downstream 69360 9793937 ~ 9797689 (-)
CI01000340_09882272_09889768 EEFSEC coding upstream 14750 9882103 ~ 9889768 (-)
CI01000340_09898618_09904814 RFT1 coding upstream 31265 9898618 ~ 9904814 (-)
CI01000340_09907511_09910003 SIRT4 coding upstream 40158 9907511 ~ 9910003 (-)
CI01000340_09911298_09920295 NA coding upstream 43926 9911279 ~ 9920295 (-)
CI01000340_09922690_09932467 NA coding upstream 55036 9922389 ~ 9932982 (-)
G491980 NA non-coding downstream 8504 9858271 ~ 9858545 (-)
G491978 NA non-coding downstream 11745 9854906 ~ 9855304 (-)
G491970 NA non-coding downstream 100475 9765435 ~ 9766574 (-)
G491946 NA non-coding downstream 173678 9691608 ~ 9693371 (-)
G491938 NA non-coding downstream 241821 9624884 ~ 9625228 (-)
G491992 NA non-coding upstream 90793 9958146 ~ 9958381 (-)
G491993 NA non-coding upstream 92391 9959744 ~ 9960010 (-)
G491915 NA non-coding upstream 164967 10032320 ~ 10034890 (-)
G492001 NA non-coding upstream 198176 10065529 ~ 10067185 (-)
G491712 NA other downstream 1067472 8799201 ~ 8799577 (-)
G489511 NA other downstream 3539677 6320457 ~ 6327372 (-)
CI01000340_06095704_06194498 MAST2 other downstream 3646407 6095704 ~ 6194501 (-)
CI01000340_05321995_05329778 ATG4C other downstream 4541905 5320753 ~ 5330215 (-)
CI01000340_04598932_04627160 NA other downstream 5207988 4598714 ~ 4627447 (-)
CI01000340_10025958_10028902 SRSF3 other upstream 154539 10025656 ~ 10029589 (-)
CI01000340_10357202_10357606 NA other upstream 489831 10356758 ~ 10359856 (-)
G493109 NA other upstream 1806393 11673746 ~ 11677994 (-)
G493266 NA other upstream 2199824 12067177 ~ 12116900 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other upstream 2744863 12577435 ~ 12625758 (-)

Expression


Co-expression Network