Gene
RNA
| Item | Value |
|---|---|
| gene id | G491993 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 9959744 ~ 9960010 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU564357 | True | 267 | lncRNA | 0.37 | 1 | 9959744 | 9960010 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_09922690_09932467 | NA | coding | downstream | 26762 | 9922389 ~ 9932982 (-) |
| CI01000340_09911298_09920295 | NA | coding | downstream | 39449 | 9911279 ~ 9920295 (-) |
| CI01000340_09907511_09910003 | SIRT4 | coding | downstream | 49741 | 9907511 ~ 9910003 (-) |
| CI01000340_09898618_09904814 | RFT1 | coding | downstream | 54930 | 9898618 ~ 9904814 (-) |
| CI01000340_09882272_09889768 | EEFSEC | coding | downstream | 69976 | 9882103 ~ 9889768 (-) |
| CI01000340_09961043_09968792 | SLC2A11A | coding | upstream | 985 | 9960995 ~ 9968985 (-) |
| CI01000340_09985390_09986420 | HDHD3 | coding | upstream | 25165 | 9985175 ~ 9986420 (-) |
| CI01000340_09987410_09989834 | NA | coding | upstream | 27298 | 9987308 ~ 9991512 (-) |
| CI01000340_10005818_10020244 | NA | coding | upstream | 45682 | 10005692 ~ 10020244 (-) |
| CI01000340_10025958_10028902 | SRSF3 | coding | upstream | 65646 | 10025656 ~ 10029589 (-) |
| G491992 | NA | non-coding | downstream | 1363 | 9958146 ~ 9958381 (-) |
| G491983 | NA | non-coding | downstream | 92391 | 9867049 ~ 9867353 (-) |
| G491980 | NA | non-coding | downstream | 101199 | 9858271 ~ 9858545 (-) |
| G491978 | NA | non-coding | downstream | 104440 | 9854906 ~ 9855304 (-) |
| G491915 | NA | non-coding | upstream | 72310 | 10032320 ~ 10034890 (-) |
| G492001 | NA | non-coding | upstream | 105519 | 10065529 ~ 10067185 (-) |
| G492000 | NA | non-coding | upstream | 112022 | 10072032 ~ 10073240 (-) |
| G492005 | NA | non-coding | upstream | 136662 | 10096672 ~ 10102409 (-) |
| G492017 | NA | non-coding | upstream | 165031 | 10125041 ~ 10125278 (-) |
| G491712 | NA | other | downstream | 1160167 | 8799201 ~ 8799577 (-) |
| G489511 | NA | other | downstream | 3632372 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 3739102 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 4634600 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 5300683 | 4598714 ~ 4627447 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 397174 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 1713736 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 2107167 | 12067177 ~ 12116900 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | upstream | 2652206 | 12577435 ~ 12625758 (-) |
