Gene
RNA
| Item | Value |
|---|---|
| gene id | G492017 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 10125041 ~ 10125278 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU564385 | True | 238 | lncRNA | 0.41 | 1 | 10125041 | 10125278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_10117381_10122090 | SYNPR | coding | downstream | 2951 | 10116722 ~ 10122090 (-) |
| CI01000340_10051115_10063764 | SLC6A13 | coding | downstream | 60804 | 10050524 ~ 10064237 (-) |
| CI01000340_10025958_10028902 | SRSF3 | coding | downstream | 95452 | 10025656 ~ 10029589 (-) |
| CI01000340_10005818_10020244 | NA | coding | downstream | 104797 | 10005692 ~ 10020244 (-) |
| CI01000340_09987410_09989834 | NA | coding | downstream | 133529 | 9987308 ~ 9991512 (-) |
| CI01000340_10258762_10264352 | NA | coding | upstream | 133275 | 10258553 ~ 10265625 (-) |
| CI01000340_10270796_10271185 | NA | coding | upstream | 145152 | 10270430 ~ 10271269 (-) |
| CI01000340_10357202_10357606 | NA | coding | upstream | 231480 | 10356758 ~ 10359856 (-) |
| CI01000340_10468562_10470670 | CAV3 | coding | upstream | 342785 | 10468063 ~ 10472083 (-) |
| CI01000340_10473924_10477962 | NA | coding | upstream | 348591 | 10473869 ~ 10479040 (-) |
| G492005 | NA | non-coding | downstream | 22632 | 10096672 ~ 10102409 (-) |
| G492000 | NA | non-coding | downstream | 51801 | 10072032 ~ 10073240 (-) |
| G492001 | NA | non-coding | downstream | 57856 | 10065529 ~ 10067185 (-) |
| G491915 | NA | non-coding | downstream | 90151 | 10032320 ~ 10034890 (-) |
| G491993 | NA | non-coding | downstream | 165031 | 9959744 ~ 9960010 (-) |
| G492020 | NA | non-coding | upstream | 3782 | 10129060 ~ 10129260 (-) |
| G491908 | NA | non-coding | upstream | 11967 | 10137245 ~ 10222822 (-) |
| G492037 | NA | non-coding | upstream | 110569 | 10235847 ~ 10236277 (-) |
| G492050 | NA | non-coding | upstream | 204583 | 10329861 ~ 10339931 (-) |
| G492047 | NA | non-coding | upstream | 224779 | 10350057 ~ 10353949 (-) |
| G491712 | NA | other | downstream | 1325464 | 8799201 ~ 8799577 (-) |
| G489511 | NA | other | downstream | 3797669 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 3904399 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 4799897 | 5320753 ~ 5330215 (-) |
| G493109 | NA | other | upstream | 1548468 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 1941899 | 12067177 ~ 12116900 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | upstream | 2486938 | 12577435 ~ 12625758 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 4088070 | 14318365 ~ 14336258 (-) |
