Gene
RNA
| Item | Value |
|---|---|
| gene id | G492047 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 10350057 ~ 10353949 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU564416 | True | 819 | lncRNA | 0.53 | 3 | 10350057 | 10353949 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_10270796_10271185 | NA | coding | downstream | 78788 | 10270430 ~ 10271269 (-) |
| CI01000340_10258762_10264352 | NA | coding | downstream | 84432 | 10258553 ~ 10265625 (-) |
| CI01000340_10117381_10122090 | SYNPR | coding | downstream | 227967 | 10116722 ~ 10122090 (-) |
| CI01000340_10051115_10063764 | SLC6A13 | coding | downstream | 285820 | 10050524 ~ 10064237 (-) |
| CI01000340_10025958_10028902 | SRSF3 | coding | downstream | 320468 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | coding | upstream | 2809 | 10356758 ~ 10359856 (-) |
| CI01000340_10468562_10470670 | CAV3 | coding | upstream | 114114 | 10468063 ~ 10472083 (-) |
| CI01000340_10473924_10477962 | NA | coding | upstream | 119920 | 10473869 ~ 10479040 (-) |
| CI01000340_10485958_10487241 | NA | coding | upstream | 131976 | 10485925 ~ 10487330 (-) |
| CI01000340_10497000_10501726 | PARP3 | coding | upstream | 142687 | 10496636 ~ 10502577 (-) |
| G492050 | NA | non-coding | downstream | 10126 | 10329861 ~ 10339931 (-) |
| G492037 | NA | non-coding | downstream | 113780 | 10235847 ~ 10236277 (-) |
| G491908 | NA | non-coding | downstream | 127235 | 10137245 ~ 10222822 (-) |
| G492020 | NA | non-coding | downstream | 220797 | 10129060 ~ 10129260 (-) |
| G492017 | NA | non-coding | downstream | 224779 | 10125041 ~ 10125278 (-) |
| G492343 | NA | non-coding | upstream | 325369 | 10679318 ~ 10679596 (-) |
| G492364 | NA | non-coding | upstream | 398779 | 10752728 ~ 10752946 (-) |
| G492371 | NA | non-coding | upstream | 427434 | 10781383 ~ 10784905 (-) |
| G492381 | NA | non-coding | upstream | 434018 | 10787967 ~ 10788183 (-) |
| G491712 | NA | other | downstream | 1550480 | 8799201 ~ 8799577 (-) |
| G489511 | NA | other | downstream | 4022685 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 4129415 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 5024913 | 5320753 ~ 5330215 (-) |
| G493109 | NA | other | upstream | 1319797 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 1713228 | 12067177 ~ 12116900 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | upstream | 2258267 | 12577435 ~ 12625758 (-) |
| CI01000340_14318434_14336130 | NA | other | upstream | 3859399 | 14318365 ~ 14336258 (-) |
