G492137


Basic Information

Item Value
gene id G492137
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10477457 ~ 10477664 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564511
CAAAAAAATCTCACTGGATTATTACAATTAATGCCAAAAGGAATGTTTGGAAAATAAACTGATATTTCCCACTGATGACTGGCTTTTTTTTTTGTGAAAATACTAATGTGCCTAAGACTTTTGCACAGTACTATATATAACTAAACAAATAAAAAGGTCTAAATGGGACTGTTGCCACCATTAGGCTGGAGAAACTACTCATTTAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564511 True 208 lncRNA 0.32 1 10477457 10477664

Neighbor

gene id symbol gene type direction distance location
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 10934 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 82190 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 121357 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 223004 10252718 ~ 10254453 (+)
CI01000340_10227896_10249819 TWF2, WDR82P1, WDR82.L, WDR82.S, WDR82, SWD2 coding upstream 226689 10227896 ~ 10250768 (+)
CI01000340_10644426_10645811 GPX1, GPX1B coding downstream 166762 10644426 ~ 10645850 (+)
CI01000340_10731548_10747121 MST1RA coding downstream 253009 10730673 ~ 10747648 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 303804 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 312708 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 390573 10868237 ~ 10870398 (+)
G492136 NA non-coding upstream 891 10476141 ~ 10476566 (+)
G492101 NA non-coding upstream 6533 10468200 ~ 10470924 (+)
G491108 NA non-coding upstream 358251 10116156 ~ 10119206 (+)
G490915 NA non-coding upstream 445132 10029238 ~ 10032325 (+)
G490875 NA non-coding upstream 449336 10021887 ~ 10028121 (+)
G492139 NA non-coding downstream 926 10478590 ~ 10478848 (+)
G492142 NA non-coding downstream 4625 10482289 ~ 10482510 (+)
G492143 NA non-coding downstream 4974 10482638 ~ 10482969 (+)
G492144 NA non-coding downstream 5322 10482986 ~ 10483297 (+)
G492146 NA non-coding downstream 10289 10487953 ~ 10488356 (+)
G490896 NA other upstream 632405 9831473 ~ 9845052 (+)
G490839 NA other upstream 1239898 9234973 ~ 9237559 (+)
G490826 NA other upstream 1346060 9125184 ~ 9131397 (+)
G490645 NA other upstream 1434356 9038812 ~ 9043101 (+)
G489634 NA other upstream 3776669 6694221 ~ 6700788 (+)
G492194 NA other downstream 174019 10651683 ~ 10652694 (+)
G492847 NA other downstream 1131442 11609106 ~ 11696961 (+)
G493617 NA other downstream 2577728 13055392 ~ 13069652 (+)
G493740 NA other downstream 3037563 13515227 ~ 13517111 (+)

Expression


Co-expression Network