G492142


Basic Information

Item Value
gene id G492142
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10482289 ~ 10482510 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564516
TTTTTTTTGGTGCATAGAGACATCATGAATATGAATCTCAACAATGGTGACAAACAACAAAGCTTTTTGTGACTTTAGTAGCTTGTTTTGTGACGTTCAGAGTTGATCTTTTTTTCTTTCTTTTTTTTATTGTCACCATTGTTGAGATTCATACGCTGATTCTTGATATCTGTGTGAGTCTGTATGAACTTGCCAAAACATTTTATGTGTAATGGTTTCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564516 True 222 lncRNA 0.32 1 10482289 10482510

Neighbor

gene id symbol gene type direction distance location
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 15766 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 87022 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 126189 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 227836 10252718 ~ 10254453 (+)
CI01000340_10227896_10249819 TWF2, WDR82P1, WDR82.L, WDR82.S, WDR82, SWD2 coding upstream 231521 10227896 ~ 10250768 (+)
CI01000340_10644426_10645811 GPX1, GPX1B coding downstream 161916 10644426 ~ 10645850 (+)
CI01000340_10731548_10747121 MST1RA coding downstream 248163 10730673 ~ 10747648 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 298958 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 307862 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 385727 10868237 ~ 10870398 (+)
G492139 NA non-coding upstream 3441 10478590 ~ 10478848 (+)
G492137 NA non-coding upstream 4625 10477457 ~ 10477664 (+)
G492136 NA non-coding upstream 5723 10476141 ~ 10476566 (+)
G492101 NA non-coding upstream 11365 10468200 ~ 10470924 (+)
G491108 NA non-coding upstream 363083 10116156 ~ 10119206 (+)
G492143 NA non-coding downstream 128 10482638 ~ 10482969 (+)
G492144 NA non-coding downstream 476 10482986 ~ 10483297 (+)
G492146 NA non-coding downstream 5443 10487953 ~ 10488356 (+)
G492147 NA non-coding downstream 6307 10488817 ~ 10489375 (+)
G492148 NA non-coding downstream 7234 10489744 ~ 10489989 (+)
G490896 NA other upstream 637237 9831473 ~ 9845052 (+)
G490839 NA other upstream 1244730 9234973 ~ 9237559 (+)
G490826 NA other upstream 1350892 9125184 ~ 9131397 (+)
G490645 NA other upstream 1439188 9038812 ~ 9043101 (+)
G489634 NA other upstream 3781501 6694221 ~ 6700788 (+)
G492194 NA other downstream 169173 10651683 ~ 10652694 (+)
G492847 NA other downstream 1126596 11609106 ~ 11696961 (+)
G493617 NA other downstream 2572882 13055392 ~ 13069652 (+)
G493740 NA other downstream 3032717 13515227 ~ 13517111 (+)

Expression


Co-expression Network