G492148


Basic Information

Item Value
gene id G492148
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10489744 ~ 10489989 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564522
GACTATGGCAAATTCTGAATCATGCCAAATTTAAATATTGCCTCATGGGACCCAGCAAATTTTTTTGTTTTTTTGTTTTTTTCTTAGAGACTCTACATGTCTGGTGCATCTTATAGAAAATATCTTGGACCATTCAAAGATACTAAATGTTTGGAAGTTTAGCAATGGAAAGTTATTTCCCTTGTTTTTTGTTTTGTTTGTTTTTTTAAATGGAAAACAACATAATTCATTATATTTTACTGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564522 True 246 lncRNA 0.29 1 10489744 10489989

Neighbor

gene id symbol gene type direction distance location
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 23221 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 94477 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 133644 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 235291 10252718 ~ 10254453 (+)
CI01000340_10227896_10249819 TWF2, WDR82P1, WDR82.L, WDR82.S, WDR82, SWD2 coding upstream 238976 10227896 ~ 10250768 (+)
CI01000340_10644426_10645811 GPX1, GPX1B coding downstream 154437 10644426 ~ 10645850 (+)
CI01000340_10731548_10747121 MST1RA coding downstream 240684 10730673 ~ 10747648 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 291479 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 300383 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 378248 10868237 ~ 10870398 (+)
G492147 NA non-coding upstream 369 10488817 ~ 10489375 (+)
G492146 NA non-coding upstream 1388 10487953 ~ 10488356 (+)
G492144 NA non-coding upstream 6447 10482986 ~ 10483297 (+)
G492143 NA non-coding upstream 6775 10482638 ~ 10482969 (+)
G492142 NA non-coding upstream 7234 10482289 ~ 10482510 (+)
G492151 NA non-coding downstream 5579 10495568 ~ 10495795 (+)
G492121 NA non-coding downstream 8617 10498606 ~ 10499307 (+)
G492123 NA non-coding downstream 14201 10504190 ~ 10504527 (+)
G492162 NA non-coding downstream 47810 10537799 ~ 10538005 (+)
G492163 NA non-coding downstream 51461 10541450 ~ 10541681 (+)
G490896 NA other upstream 644692 9831473 ~ 9845052 (+)
G490839 NA other upstream 1252185 9234973 ~ 9237559 (+)
G490826 NA other upstream 1358347 9125184 ~ 9131397 (+)
G490645 NA other upstream 1446643 9038812 ~ 9043101 (+)
G489634 NA other upstream 3788956 6694221 ~ 6700788 (+)
G492194 NA other downstream 161694 10651683 ~ 10652694 (+)
G492847 NA other downstream 1119117 11609106 ~ 11696961 (+)
G493617 NA other downstream 2565403 13055392 ~ 13069652 (+)
G493740 NA other downstream 3025238 13515227 ~ 13517111 (+)

Expression


Co-expression Network