G492123


Basic Information

Item Value
gene id G492123
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10504190 ~ 10504527 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564497
TCTCAAACAATACTTTATTATGGTTTCCATAAAAAGAACAGGTATACAGAGTTTAAACTGGCATCCCACTGATATTATCTAACTAGTCAGAGAGAGAAAGAGAGAGAGAAACAAAATGGGATATTGTACTCACAGCACGTTGAGAACAACATTACAGGCATTCTTTATTCCGAATAGCCTCCTCAACATTAGCAAACACTTGATTTCATGACTAGTGAAGATAAGATTTATCTGTATACCGCATTTGGCAAACAAACAGGAATCCTGTTTCTCAGAGTGAAGATGTTGTTGAGTCCACTACCTCTCTGCCATTACATACTGTAGGCACGATGTTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564497 True 338 lncRNA 0.38 1 10504190 10504527

Neighbor

gene id symbol gene type direction distance location
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 37667 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 108923 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 148090 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 249737 10252718 ~ 10254453 (+)
CI01000340_10227896_10249819 TWF2, WDR82P1, WDR82.L, WDR82.S, WDR82, SWD2 coding upstream 253422 10227896 ~ 10250768 (+)
CI01000340_10644426_10645811 GPX1, GPX1B coding downstream 139899 10644426 ~ 10645850 (+)
CI01000340_10731548_10747121 MST1RA coding downstream 226146 10730673 ~ 10747648 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 276941 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 285845 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 363710 10868237 ~ 10870398 (+)
G492121 NA non-coding upstream 4883 10498606 ~ 10499307 (+)
G492151 NA non-coding upstream 8395 10495568 ~ 10495795 (+)
G492148 NA non-coding upstream 14201 10489744 ~ 10489989 (+)
G492147 NA non-coding upstream 14815 10488817 ~ 10489375 (+)
G492146 NA non-coding upstream 15834 10487953 ~ 10488356 (+)
G492162 NA non-coding downstream 33272 10537799 ~ 10538005 (+)
G492163 NA non-coding downstream 36923 10541450 ~ 10541681 (+)
G492164 NA non-coding downstream 38721 10543248 ~ 10543535 (+)
G492165 NA non-coding downstream 43847 10548374 ~ 10548594 (+)
G492166 NA non-coding downstream 45389 10549916 ~ 10550287 (+)
G490896 NA other upstream 659138 9831473 ~ 9845052 (+)
G490839 NA other upstream 1266631 9234973 ~ 9237559 (+)
G490826 NA other upstream 1372793 9125184 ~ 9131397 (+)
G490645 NA other upstream 1461089 9038812 ~ 9043101 (+)
G489634 NA other upstream 3803402 6694221 ~ 6700788 (+)
G492194 NA other downstream 147156 10651683 ~ 10652694 (+)
G492847 NA other downstream 1104579 11609106 ~ 11696961 (+)
G493617 NA other downstream 2550865 13055392 ~ 13069652 (+)
G493740 NA other downstream 3010700 13515227 ~ 13517111 (+)

Expression


Co-expression Network