G492166


Basic Information

Item Value
gene id G492166
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 10549916 ~ 10550287 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU564542
AACGGTTGTTCGCCTCTGTTTGGGTTTCTGTTATTTTTAAACCACAGCTTGTTTTGGGCAGCCCTGCTCGCCAAAATCCAAACACATATAGGCTACGTAGTCATTATCATGTGTTTATTTCCATCTCGATTGCATTTAGTACATTAACTTTAACACCGTTCATAAAAATGGGCGAAAACATTAACCGATGATTAATGGTATGCAATTTTAGGAGACAGCAGACGTGGGAAAACCTGCACATTTAGCCTAGATACATCATGATTTTGATCGTTTCATAGAGGCAAAAATCAAAACCAAGGACATGAACAAACACCATTATTATTGTGGTTCGAGAGCAAGGTTAAACTTGAATGGTTAAAAAACACCAGGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU564542 True 372 lncRNA 0.38 1 10549916 10550287

Neighbor

gene id symbol gene type direction distance location
CI01000340_10455853_10465771 OXTRL, OXTR coding upstream 83393 10455299 ~ 10466523 (+)
CI01000340_10388851_10395247 NA coding upstream 154649 10388629 ~ 10395267 (+)
CI01000340_10296583_10355505 SRGAP3 coding upstream 193816 10296583 ~ 10356100 (+)
CI01000340_10252718_10253859 NA coding upstream 295463 10252718 ~ 10254453 (+)
CI01000340_10227896_10249819 TWF2, WDR82P1, WDR82.L, WDR82.S, WDR82, SWD2 coding upstream 299148 10227896 ~ 10250768 (+)
CI01000340_10644426_10645811 GPX1, GPX1B coding downstream 94139 10644426 ~ 10645850 (+)
CI01000340_10731548_10747121 MST1RA coding downstream 180386 10730673 ~ 10747648 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV coding downstream 231181 10781468 ~ 10787792 (+)
CI01000340_10790372_10803993 NA coding downstream 240085 10790372 ~ 10804399 (+)
CI01000340_10869243_10869956 NA coding downstream 317950 10868237 ~ 10870398 (+)
G492165 NA non-coding upstream 1322 10548374 ~ 10548594 (+)
G492164 NA non-coding upstream 6381 10543248 ~ 10543535 (+)
G492163 NA non-coding upstream 8235 10541450 ~ 10541681 (+)
G492162 NA non-coding upstream 11911 10537799 ~ 10538005 (+)
G492123 NA non-coding upstream 45389 10504190 ~ 10504527 (+)
G492167 NA non-coding downstream 341 10550628 ~ 10551042 (+)
G492168 NA non-coding downstream 891 10551178 ~ 10551951 (+)
G492223 NA non-coding downstream 92545 10642832 ~ 10643509 (+)
G492226 NA non-coding downstream 129063 10679350 ~ 10679596 (+)
G492227 NA non-coding downstream 129800 10680087 ~ 10680435 (+)
G490896 NA other upstream 704864 9831473 ~ 9845052 (+)
G490839 NA other upstream 1312357 9234973 ~ 9237559 (+)
G490826 NA other upstream 1418519 9125184 ~ 9131397 (+)
G490645 NA other upstream 1506815 9038812 ~ 9043101 (+)
G489634 NA other upstream 3849128 6694221 ~ 6700788 (+)
G492194 NA other downstream 101396 10651683 ~ 10652694 (+)
G492847 NA other downstream 1058819 11609106 ~ 11696961 (+)
G493617 NA other downstream 2505105 13055392 ~ 13069652 (+)
G493740 NA other downstream 2964940 13515227 ~ 13517111 (+)

Expression


Co-expression Network